RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 ANKIB1Q9P2G1 1089 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
PDGFC-206ENST00000510982 PI4KAP2A4QPH2 592 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 ECE2O60344 883 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 LBX1P52954 281 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
PDGFC-206ENST00000510982 KSR2Q6VAB6 950 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 PI4KAP1Q8N8J0 262 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 TRPM4Q8TD43 1214 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 TSR2Q969E8 191 aaKnown RBP11.15□□□□□ -0.62
PDGFC-206ENST00000510982 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 ZNF408Q9H9D4 720 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 TLL2Q9Y6L7 1015 aa11.15□□□□□ -0.62
PDGFC-206ENST00000510982 NEXNQ0ZGT2 675 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 CCDC27Q2M243 656 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 USP48Q86UV5 1035 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 WWC1Q8IX03 1113 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 BEGAINQ9BUH8 593 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 GGA1Q9UJY5 639 aa11.14□□□□□ -0.63
PDGFC-206ENST00000510982 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
PDGFC-206ENST00000510982 UFL1O94874 794 aa11.13□□□□□ -0.63
PDGFC-206ENST00000510982 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
PDGFC-206ENST00000510982 RPS12P25398 132 aaKnown RBP11.13□□□□□ -0.63
PDGFC-206ENST00000510982 TWISTNBQ3B726 338 aaPredicted RBP11.13□□□□□ -0.63
PDGFC-206ENST00000510982 TBC1D10BQ4KMP7 808 aaPredicted RBP11.13□□□□□ -0.63
PDGFC-206ENST00000510982 SAPCD2Q86UD0 394 aa11.13□□□□□ -0.63
PDGFC-206ENST00000510982 ANKRD18AQ8IVF6 992 aa11.13□□□□□ -0.63
PDGFC-206ENST00000510982 AOC2O75106 756 aa11.12□□□□□ -0.63
PDGFC-206ENST00000510982 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
PDGFC-206ENST00000510982 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
PDGFC-206ENST00000510982 HSPA8P11142 646 aaKnown RBP11.12□□□□□ -0.63
PDGFC-206ENST00000510982 MAP2K2P36507 400 aa11.12□□□□□ -0.63
PDGFC-206ENST00000510982 DLK2Q6UY11 383 aa11.12□□□□□ -0.63
PDGFC-206ENST00000510982 G2E3Q7L622 706 aa11.12□□□□□ -0.63
PDGFC-206ENST00000510982 DCPSQ96C86 337 aaKnown RBP11.12□□□□□ -0.63
PDGFC-206ENST00000510982 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
PDGFC-206ENST00000510982 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 EGFRP00533 1210 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 ATP2B4P23634 1241 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 CWF19L2Q2TBE0 894 aaKnown RBP11.11□□□□□ -0.63
PDGFC-206ENST00000510982 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 TTLL11Q8NHH1 800 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
PDGFC-206ENST00000510982 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 RTL9Q8NET4 1388 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 DUOX1Q9NRD9 1551 aa11.11□□□□□ -0.63
PDGFC-206ENST00000510982 XDHP47989 1333 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 NEURL1BA8MQ27 555 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 H7C1W4 665 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 ANP32CO43423 234 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
PDGFC-206ENST00000510982 CTSWP56202 376 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 COL4A1P02462 1669 aa11.1□□□□□ -0.63
PDGFC-206ENST00000510982 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
PDGFC-206ENST00000510982 IL16Q14005 1332 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 HUNKP57058 714 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 KIF4BQ2VIQ3 1234 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
PDGFC-206ENST00000510982 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
PDGFC-206ENST00000510982 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 PODNQ7Z5L7 613 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 AGBL3Q8NEM8 1001 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 GREM2Q9H772 168 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
PDGFC-206ENST00000510982 MINPP1Q9UNW1 487 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 LRRC37AA6NMS7 1700 aa11.09□□□□□ -0.63
PDGFC-206ENST00000510982 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 WTIPA6NIX2 430 aaPredicted RBP11.08□□□□□ -0.64
PDGFC-206ENST00000510982 VAMP4O75379 141 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 FLIIQ13045 1269 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 FKBP5Q13451 457 aaPredicted RBP11.08□□□□□ -0.64
PDGFC-206ENST00000510982 SCARF1Q14162 830 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 GCKRQ14397 625 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 C2orf69Q8N8R5 385 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 GBA2Q9HCG7 927 aaPredicted RBP11.08□□□□□ -0.64
PDGFC-206ENST00000510982 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
PDGFC-206ENST00000510982 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-206ENST00000510982 ADM5C9JUS6 153 aa11.07□□□□□ -0.64
PDGFC-206ENST00000510982 USP17L8P0C7I0 530 aa11.07□□□□□ -0.64
PDGFC-206ENST00000510982 IGHMBP2P38935 993 aaKnown RBP11.07□□□□□ -0.64
PDGFC-206ENST00000510982 NOGQ13253 232 aa11.07□□□□□ -0.64
PDGFC-206ENST00000510982 DNAAF4Q8WXU2 420 aa11.07□□□□□ -0.64
PDGFC-206ENST00000510982 ASTN2O75129 1339 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-206ENST00000510982 CA12O43570 354 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 ITGA6P23229 1130 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 CCT4P50991 539 aaKnown RBP11.06□□□□□ -0.64
PDGFC-206ENST00000510982 BRPF1P55201 1214 aaPredicted RBP11.06□□□□□ -0.64
PDGFC-206ENST00000510982 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
PDGFC-206ENST00000510982 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
PDGFC-206ENST00000510982 ANGEL2Q5VTE6 544 aaKnown RBP11.06□□□□□ -0.64
PDGFC-206ENST00000510982 RGMBQ6NW40 437 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 LINS1Q8NG48 757 aa11.06□□□□□ -0.64
PDGFC-206ENST00000510982 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms