RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 CTSWP56202 376 aa12.5□□□□□ -0.41
BRIX1-203ENST00000510834 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
BRIX1-203ENST00000510834 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
BRIX1-203ENST00000510834 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
BRIX1-203ENST00000510834 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
BRIX1-203ENST00000510834 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
BRIX1-203ENST00000510834 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
BRIX1-203ENST00000510834 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
BRIX1-203ENST00000510834 RPS6KB1P23443 525 aa12.49□□□□□ -0.41
BRIX1-203ENST00000510834 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
BRIX1-203ENST00000510834 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
BRIX1-203ENST00000510834 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 ZMYM1Q5SVZ6 1142 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 UBN2Q6ZU65 1347 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 ANKRD18BA2A2Z9 1011 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 MBD3O95983 291 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 ITGA6P23229 1130 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 LRRFIP1Q32MZ4 808 aaKnown RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 CCDC129Q6ZRS4 1044 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 ZNF34Q8IZ26 560 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 AK7Q96M32 723 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 SEC62Q99442 399 aaKnown RBP12.48□□□□□ -0.41
BRIX1-203ENST00000510834 GRPEL1Q9HAV7 217 aa12.48□□□□□ -0.41
BRIX1-203ENST00000510834 PDE8AO60658 829 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 TOM1O60784 492 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 ME3Q16798 604 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 TTC39AQ5SRH9 613 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 LARP6Q9BRS8 491 aaKnown RBP12.47□□□□□ -0.41
BRIX1-203ENST00000510834 DSCC1Q9BVC3 393 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 GREM2Q9H772 168 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
BRIX1-203ENST00000510834 SCN7AQ01118 1682 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 DOCK2Q92608 1830 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
BRIX1-203ENST00000510834 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
BRIX1-203ENST00000510834 STX6O43752 255 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 CHGBP05060 677 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
BRIX1-203ENST00000510834 SYNE4Q8N205 404 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 TPCN1Q9ULQ1 816 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 TBC1D2BQ9UPU7 963 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 TAF6LQ9Y6J9 622 aa12.47□□□□□ -0.41
BRIX1-203ENST00000510834 A0A1B0GUL6 1792 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 LOC102724428A0A0B4J2F2 783 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
BRIX1-203ENST00000510834 ZSCAN22P10073 491 aaPredicted RBP12.46□□□□□ -0.41
BRIX1-203ENST00000510834 SYT1P21579 422 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 ADORA1P30542 326 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 ATP6V1AP38606 617 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
BRIX1-203ENST00000510834 SIK1P57059 783 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 ZNF445P59923 1031 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 ATP2B3Q16720 1220 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 METTL24Q5JXM2 366 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 INTS5Q6P9B9 1019 aaKnown RBP12.46□□□□□ -0.41
BRIX1-203ENST00000510834 GPT2Q8TD30 523 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 RIPOR2Q9Y4F9 1068 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 MAST3O60307 1309 aa12.46□□□□□ -0.41
BRIX1-203ENST00000510834 GJB2P29033 226 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 CAVIN1Q6NZI2 390 aaKnown RBP12.45□□□□□ -0.42
BRIX1-203ENST00000510834 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 A0A0G2JS52 829 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 ZFYP08048 801 aaPredicted RBP12.45□□□□□ -0.42
BRIX1-203ENST00000510834 CYP21A2P08686 494 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
BRIX1-203ENST00000510834 TOB2Q14106 344 aaPredicted RBP12.45□□□□□ -0.42
BRIX1-203ENST00000510834 GAS2L3Q86XJ1 694 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
BRIX1-203ENST00000510834 CHAMP1Q96JM3 812 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 ATP6V1DQ9Y5K8 247 aa12.45□□□□□ -0.42
BRIX1-203ENST00000510834 F13A1P00488 732 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
BRIX1-203ENST00000510834 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 VGLL2Q8N8G2 317 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 MYH15Q9Y2K3 1946 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
BRIX1-203ENST00000510834 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
BRIX1-203ENST00000510834 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
BRIX1-203ENST00000510834 ZNF512BQ96KM6 892 aaPredicted RBP12.44□□□□□ -0.42
BRIX1-203ENST00000510834 BTAF1O14981 1849 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms