RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CHMP4BP1P59074 171 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 TYRO3Q06418 890 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 GPATCH11Q8N954 259 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 ERMNQ8TAM6 284 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 ESR2Q92731 530 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 PSMA7O14818 248 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
NEK1-206ENST00000510533 ACTN2P35609 894 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 HS1BP3Q53T59 392 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 TACC1O75410 805 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 HLA-DOAP06340 250 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 CCDC174Q6PII3 467 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 SMC5Q8IY18 1101 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 ZFP91Q96JP5 570 aaPredicted RBP12.08□□□□□ -0.48
NEK1-206ENST00000510533 SELENOOQ9BVL4 669 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 IKBKGQ9Y6K9 419 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 CTAGE9A4FU28 777 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 OPA1O60313 960 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 IFIT1BQ5T764 474 aaKnown RBP12.07□□□□□ -0.48
NEK1-206ENST00000510533 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
NEK1-206ENST00000510533 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 GOLGA1Q92805 767 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 DRC1Q96MC2 740 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 SPTLC2O15270 562 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 TRMT1LQ7Z2T5 733 aaKnown RBP12.07□□□□□ -0.48
NEK1-206ENST00000510533 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 CD109Q6YHK3 1445 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 EXOC5O00471 708 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 ATP2C2O75185 946 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 PPM1EQ8WY54 764 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 NSRP1Q9H0G5 558 aaKnown RBP12.07□□□□□ -0.48
NEK1-206ENST00000510533 MMRN2Q9H8L6 949 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 RSPH14Q9UHP6 348 aa12.07□□□□□ -0.48
NEK1-206ENST00000510533 C16orf71Q8IYS4 520 aaPredicted RBP12.06□□□□□ -0.48
NEK1-206ENST00000510533 FEZ1Q99689 392 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 ACEP12821 1306 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 A0A1W2PRG0 241 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 GSTO1P78417 241 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 SLC4A8Q2Y0W8 1093 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
NEK1-206ENST00000510533 SLC4A4Q9Y6R1 1079 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 KRT83P78385 493 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 FBF1Q8TES7 1133 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 FERMT1Q9BQL6 677 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 PTGS1P23219 599 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 LMOD1P29536 600 aaPredicted RBP12.06□□□□□ -0.48
NEK1-206ENST00000510533 NMIQ13287 307 aaPredicted RBP12.06□□□□□ -0.48
NEK1-206ENST00000510533 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 RASAL2Q9UJF2 1139 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 GRM8O00222 908 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 TSPY3P0CV98 308 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 TSPY8P0CW00 308 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 PPP1R14CQ8TAE6 165 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 ZMYND15Q9H091 742 aa12.06□□□□□ -0.48
NEK1-206ENST00000510533 CYP7A1P22680 504 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 GNAQP50148 359 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 PRPHP41219 470 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 ASIC1P78348 528 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 WDR78Q5VTH9 848 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 ATRIPQ8WXE1 791 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 DHX58Q96C10 678 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.05□□□□□ -0.48
NEK1-206ENST00000510533 V9GYY5 206 aaPredicted RBP12.05□□□□□ -0.48
NEK1-206ENST00000510533 HMGXB3Q12766 1538 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 ABCA10Q8WWZ4 1543 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 TTC41PQ6P2S7 1318 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 KRT86O43790 486 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 IL15P40933 162 aaPredicted RBP12.05□□□□□ -0.48
NEK1-206ENST00000510533 AK2P54819 239 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 TUBB4BP68371 445 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 KRT28Q7Z3Y7 464 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 XAGE3Q8WTP9 111 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 TRIM75PA6NK02 468 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 KIF5AQ12840 1032 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 TSNARE1Q96NA8 513 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 NPHP3Q7Z494 1330 aa12.05□□□□□ -0.48
NEK1-206ENST00000510533 KSR2Q6VAB6 950 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 USP37Q86T82 979 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 BICD1Q96G01 975 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
NEK1-206ENST00000510533 DCTPP1Q9H773 170 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 HEATR3Q7Z4Q2 680 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 KRT13P13646 458 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 COPS6Q7L5N1 327 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 CCDC77Q9BR77 488 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 COMMD10Q9Y6G5 202 aa12.04□□□□□ -0.48
NEK1-206ENST00000510533 KIF4AO95239 1232 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 FERP16591 822 aa12.03□□□□□ -0.48
NEK1-206ENST00000510533 CAPN2P17655 700 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms