RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
ARHGEF28-209ENST00000510131 TNFRSF10BO14763 440 aa8.72□□□□□ -1.01
ARHGEF28-209ENST00000510131 NAA30Q147X3 362 aaPredicted RBP8.72□□□□□ -1.01
ARHGEF28-209ENST00000510131 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
ARHGEF28-209ENST00000510131 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
ARHGEF28-209ENST00000510131 ATG7O95352 703 aa8.71□□□□□ -1.02
ARHGEF28-209ENST00000510131 FAM13BQ9NYF5 915 aa8.71□□□□□ -1.02
ARHGEF28-209ENST00000510131 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
ARHGEF28-209ENST00000510131 TMEM164Q5U3C3 297 aa8.7□□□□□ -1.02
ARHGEF28-209ENST00000510131 PSMG3-AS1Q96PY0 264 aa8.7□□□□□ -1.02
ARHGEF28-209ENST00000510131 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
ARHGEF28-209ENST00000510131 AKTIPQ9H8T0 292 aa8.7□□□□□ -1.02
ARHGEF28-209ENST00000510131 TRIM33Q9UPN9 1127 aa8.7□□□□□ -1.02
ARHGEF28-209ENST00000510131 ALX3O95076 343 aa8.69□□□□□ -1.02
ARHGEF28-209ENST00000510131 LRP8Q14114 963 aa8.69□□□□□ -1.02
ARHGEF28-209ENST00000510131 SETDB1Q15047 1291 aa8.69□□□□□ -1.02
ARHGEF28-209ENST00000510131 NBPF11Q86T75 865 aa8.69□□□□□ -1.02
ARHGEF28-209ENST00000510131 OR13H1Q8NG92 308 aa8.69□□□□□ -1.02
ARHGEF28-209ENST00000510131 SRA1Q9HD15 236 aaKnown RBP8.69□□□□□ -1.02
ARHGEF28-209ENST00000510131 ZAP70P43403 619 aa8.68□□□□□ -1.02
ARHGEF28-209ENST00000510131 COL13A1Q5TAT6 717 aaPredicted RBP8.68□□□□□ -1.02
ARHGEF28-209ENST00000510131 MAP4K3Q8IVH8 894 aa8.68□□□□□ -1.02
ARHGEF28-209ENST00000510131 CACTIN-AS1Q8N1I8 211 aa8.68□□□□□ -1.02
ARHGEF28-209ENST00000510131 TMEM130Q8N3G9 435 aa8.68□□□□□ -1.02
ARHGEF28-209ENST00000510131 FNDC3AQ9Y2H6 1198 aaKnown RBP8.68□□□□□ -1.02
ARHGEF28-209ENST00000510131 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 HYAL3O43820 417 aaPredicted RBP8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 HYAL2Q12891 473 aa8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 TTC39BQ5VTQ0 682 aaPredicted RBP8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 PRR23CQ6ZRP0 262 aa8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 DZIP1LQ8IYY4 767 aaKnown RBP8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 GPR152Q8TDT2 470 aa8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 DCAF11Q8TEB1 546 aa8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 STIM2Q9P246 746 aa8.67□□□□□ -1.02
ARHGEF28-209ENST00000510131 SPACA7Q96KW9 195 aa8.66□□□□□ -1.02
ARHGEF28-209ENST00000510131 MUC3BQ9H195 1237 aa8.66□□□□□ -1.02
ARHGEF28-209ENST00000510131 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
ARHGEF28-209ENST00000510131 ZBTB39O15060 712 aa8.65□□□□□ -1.02
ARHGEF28-209ENST00000510131 ATP11AP98196 1134 aa8.65□□□□□ -1.02
ARHGEF28-209ENST00000510131 LINC01387J3KSC0 135 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 SCNN1AP37088 669 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 CEP135Q66GS9 1140 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 ABTB2Q8N961 1025 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 SLAIN2Q9P270 581 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
ARHGEF28-209ENST00000510131 SMNDC1O75940 238 aaKnown RBP eCLIP8.63□□□□□ -1.03
ARHGEF28-209ENST00000510131 AGGF1Q8N302 714 aaeCLIP8.63□□□□□ -1.03
ARHGEF28-209ENST00000510131 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
ARHGEF28-209ENST00000510131 ABI2Q9NYB9 513 aaPredicted RBP8.63□□□□□ -1.03
ARHGEF28-209ENST00000510131 CDC27P30260 824 aa8.62□□□□□ -1.03
ARHGEF28-209ENST00000510131 Q6ZS46 218 aa8.62□□□□□ -1.03
ARHGEF28-209ENST00000510131 GALNT11Q8NCW6 608 aa8.62□□□□□ -1.03
ARHGEF28-209ENST00000510131 ZMYND15Q9H091 742 aa8.62□□□□□ -1.03
ARHGEF28-209ENST00000510131 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
ARHGEF28-209ENST00000510131 KIF4AO95239 1232 aa8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 GLB1P16278 677 aa8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 ATP2B4P23634 1241 aa8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 TXNDC11Q6PKC3 985 aa8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 SEPT3Q9UH03 358 aa8.61□□□□□ -1.03
ARHGEF28-209ENST00000510131 FSTP19883 344 aa8.6□□□□□ -1.03
ARHGEF28-209ENST00000510131 CDC25BP30305 580 aa8.6□□□□□ -1.03
ARHGEF28-209ENST00000510131 ADAMTSL4Q6UY14 1074 aa8.6□□□□□ -1.03
ARHGEF28-209ENST00000510131 CCDC97Q96F63 343 aaPredicted RBP8.6□□□□□ -1.03
ARHGEF28-209ENST00000510131 CD68P34810 354 aaPredicted RBP8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 ATCAYQ86WG3 371 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 CEP120Q8N960 986 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 NUDT16Q96DE0 195 aaKnown RBP8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 UBL7Q96S82 380 aaPredicted RBP8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 ELP3Q9H9T3 547 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 TMEM63CQ9P1W3 806 aa8.59□□□□□ -1.03
ARHGEF28-209ENST00000510131 WISP1O95388 367 aa8.58□□□□□ -1.04
ARHGEF28-209ENST00000510131 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
ARHGEF28-209ENST00000510131 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
ARHGEF28-209ENST00000510131 KCNK4Q9NYG8 393 aa8.58□□□□□ -1.04
ARHGEF28-209ENST00000510131 SERPINA10Q9UK55 444 aa8.58□□□□□ -1.04
ARHGEF28-209ENST00000510131 FSCN2O14926 492 aa8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 FAM117BQ6P1L5 589 aa8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 ACAD11Q709F0 780 aa8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 ZNF438Q7Z4V0 828 aa8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 KRTAP9-2Q9BYQ4 174 aa8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 SH2B1Q9NRF2 756 aaPredicted RBP8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 RAXQ9Y2V3 346 aa8.57□□□□□ -1.04
ARHGEF28-209ENST00000510131 TM4SF5O14894 197 aa8.56□□□□□ -1.04
ARHGEF28-209ENST00000510131 PTPRAP18433 802 aa8.56□□□□□ -1.04
ARHGEF28-209ENST00000510131 KLHL23Q8NBE8 558 aa8.56□□□□□ -1.04
ARHGEF28-209ENST00000510131 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
ARHGEF28-209ENST00000510131 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
ARHGEF28-209ENST00000510131 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
ARHGEF28-209ENST00000510131 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
ARHGEF28-209ENST00000510131 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
ARHGEF28-209ENST00000510131 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
ARHGEF28-209ENST00000510131 EPHA1P21709 976 aa8.55□□□□□ -1.04
ARHGEF28-209ENST00000510131 EDEM1Q92611 657 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms