RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 GGA1Q9UJY5 639 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
SCARB2-204ENST00000509994 CACNA1FO60840 1977 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
SCARB2-204ENST00000509994 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-204ENST00000509994 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 PSMD14O00487 310 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 FOXN1O15353 648 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 CELF2O95319 508 aaKnown RBP12.99□□□□□ -0.33
SCARB2-204ENST00000509994 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
SCARB2-204ENST00000509994 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
SCARB2-204ENST00000509994 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
SCARB2-204ENST00000509994 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SCARB2-204ENST00000509994 ECE1P42892 770 aa12.98□□□□□ -0.33
SCARB2-204ENST00000509994 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-204ENST00000509994 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
SCARB2-204ENST00000509994 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
SCARB2-204ENST00000509994 CAPNS2Q96L46 248 aa12.98□□□□□ -0.33
SCARB2-204ENST00000509994 CDC5LQ99459 802 aaKnown RBP12.98□□□□□ -0.33
SCARB2-204ENST00000509994 GLIS2Q9BZE0 524 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-204ENST00000509994 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
SCARB2-204ENST00000509994 SHTN1A0MZ66 631 aa12.97□□□□□ -0.33
SCARB2-204ENST00000509994 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-204ENST00000509994 CTSWP56202 376 aa12.97□□□□□ -0.33
SCARB2-204ENST00000509994 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
SCARB2-204ENST00000509994 TBC1D10BQ4KMP7 808 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-204ENST00000509994 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
SCARB2-204ENST00000509994 SCN9AQ15858 1988 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 XDHP47989 1333 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 IL16Q14005 1332 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 MAP2K1Q02750 393 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-204ENST00000509994 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
SCARB2-204ENST00000509994 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
SCARB2-204ENST00000509994 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 CDC37L1Q7L3B6 337 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 G2E3Q7L622 706 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 USP48Q86UV5 1035 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
SCARB2-204ENST00000509994 DCPSQ96C86 337 aaKnown RBP12.95□□□□□ -0.34
SCARB2-204ENST00000509994 MYH16Q9H6N6 1097 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 KCNQ5Q9NR82 932 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 PSME4Q14997 1843 aa12.95□□□□□ -0.34
SCARB2-204ENST00000509994 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 IGHMBP2P38935 993 aaKnown RBP12.94□□□□□ -0.34
SCARB2-204ENST00000509994 LBX1P52954 281 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 HIRAP54198 1017 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-204ENST00000509994 FLIIQ13045 1269 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 KIF4BQ2VIQ3 1234 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 CST9Q5W186 159 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 DPF2Q92785 391 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 GREM2Q9H772 168 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 TLL2Q9Y6L7 1015 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
SCARB2-204ENST00000509994 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
SCARB2-204ENST00000509994 KCNJ4P48050 445 aa12.93□□□□□ -0.34
SCARB2-204ENST00000509994 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
SCARB2-204ENST00000509994 DNAAF4Q8WXU2 420 aa12.93□□□□□ -0.34
SCARB2-204ENST00000509994 WBP1LQ9NX94 342 aa12.93□□□□□ -0.34
SCARB2-204ENST00000509994 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
SCARB2-204ENST00000509994 AOC2O75106 756 aa12.92□□□□□ -0.34
SCARB2-204ENST00000509994 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
SCARB2-204ENST00000509994 SULF1Q8IWU6 871 aa12.92□□□□□ -0.34
SCARB2-204ENST00000509994 TTLL11Q8NHH1 800 aa12.92□□□□□ -0.34
SCARB2-204ENST00000509994 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
SCARB2-204ENST00000509994 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
SCARB2-204ENST00000509994 THSD7BQ9C0I4 1608 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 EGFRP00533 1210 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 HUNKP57058 714 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 GCKRQ14397 625 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-204ENST00000509994 SAPCD2Q86UD0 394 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-204ENST00000509994 GGA3Q9NZ52 723 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
SCARB2-204ENST00000509994 USP17L3A6NCW0 530 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 USP17L4A6NCW7 530 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
SCARB2-204ENST00000509994 HSPA8P11142 646 aaKnown RBP12.9□□□□□ -0.34
SCARB2-204ENST00000509994 ITGA6P23229 1130 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
SCARB2-204ENST00000509994 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 C2orf69Q8N8R5 385 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 TSKSQ9UJT2 592 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
SCARB2-204ENST00000509994 F6X3S4 739 aa12.89□□□□□ -0.35
SCARB2-204ENST00000509994 H7C1W4 665 aa12.89□□□□□ -0.35
SCARB2-204ENST00000509994 TAF7LQ5H9L4 462 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms