RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 G2E3Q7L622 706 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 MASTLQ96GX5 879 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 NARFQ9UHQ1 456 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 FOSBP53539 338 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 KIAA2012Q0VF49 1180 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 R3HDM1Q15032 1099 aaKnown RBP6.06□□□□□ -1.44
PHF3-210ENST00000509876 TTLL6Q8N841 843 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 SLC4A4Q9Y6R1 1079 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 CARMIL3Q8ND23 1372 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 BBOX1O75936 387 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 KCNQ4P56696 695 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 CTCFLQ8NI51 663 aaPredicted RBP6.06□□□□□ -1.44
PHF3-210ENST00000509876 LPIN2Q92539 896 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 CDK5RAP3Q96JB5 506 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 PICK1Q9NRD5 415 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 CCDC196A0A1B0GTZ2 297 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 PSDA5PKW4 1024 aaPredicted RBP6.06□□□□□ -1.44
PHF3-210ENST00000509876 TRAF1Q13077 416 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 TPD52L1Q16890 204 aaPredicted RBP6.06□□□□□ -1.44
PHF3-210ENST00000509876 SH2D4AQ9H788 454 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 ZNF408Q9H9D4 720 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 POLR1AO95602 1720 aaPredicted RBP6.06□□□□□ -1.44
PHF3-210ENST00000509876 TTC41PQ6P2S7 1318 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 VPS37CA5D8V6 355 aaPredicted RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 TNFAIP1Q13829 316 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 TMEM132AQ24JP5 1023 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 FOXD4L5Q5VV16 416 aaPredicted RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 MFSD6Q6ZSS7 791 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 FOXD4L4Q8WXT5 416 aaPredicted RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 PDRG1Q9NUG6 133 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 PAG1Q9NWQ8 432 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 XDHP47989 1333 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 TSPY2A6NKD2 308 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 KDM4AO75164 1064 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 TSPY3P0CV98 308 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 TSPY8P0CW00 308 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 CATIPQ7Z7H3 387 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 DCPSQ96C86 337 aaKnown RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 KAT14Q9H8E8 782 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 NOL7Q9UMY1 257 aaKnown RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 PA2G4Q9UQ80 394 aaKnown RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 DLGAP5Q15398 846 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 RC3H1Q5TC82 1133 aaKnown RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 TRIM44Q96DX7 344 aaPredicted RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 SRP68Q9UHB9 627 aaKnown RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 CD163L1Q9NR16 1453 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 RNF123Q5XPI4 1314 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 PDCP20941 246 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 TTC6Q86TZ1 520 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 JAKMIP1Q96N16 626 aaKnown RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 TXLNAP40222 546 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 ERFEQ4G0M1 354 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 SLC9C2Q5TAH2 1124 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 MARCH10Q8NA82 808 aaPredicted RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 ZSCAN31Q96LW9 406 aaPredicted RBP6.05□□□□□ -1.44
PHF3-210ENST00000509876 KRT23Q9C075 422 aa6.05□□□□□ -1.44
PHF3-210ENST00000509876 KCNQ2O43526 872 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 GRIN3BO60391 1043 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 KIF5BP33176 963 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 HDAC1Q13547 482 aaPredicted RBP6.04□□□□□ -1.44
PHF3-210ENST00000509876 NEK4P51957 841 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 DRC7Q8IY82 874 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 SUCLG2Q96I99 432 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 MAGEB6Q8N7X4 407 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 SLC16A10Q8TF71 515 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 CNNM2Q9H8M5 875 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 R3HCC1Q9Y3T6 440 aaKnown RBP6.04□□□□□ -1.44
PHF3-210ENST00000509876 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 ARHGEF28Q8N1W1 1705 aaKnown RBP6.04□□□□□ -1.44
PHF3-210ENST00000509876 RNF113AO15541 343 aaKnown RBP6.04□□□□□ -1.44
PHF3-210ENST00000509876 C20orf194Q5TEA3 1177 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 TEX11Q8IYF3 940 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 PHLPP1O60346 1717 aa6.04□□□□□ -1.44
PHF3-210ENST00000509876 EZH2Q15910 746 aaKnown RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 CREBRFQ8IUR6 639 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 CCDC12Q8WUD4 166 aaPredicted RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 ARHGEF1Q92888 912 aaKnown RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 ZNF396Q96N95 335 aaPredicted RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 TAOK3Q9H2K8 898 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 A0A1B0GUL7 405 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 B4DLN1 442 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 IFIT3O14879 490 aaKnown RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 TAF5LO75529 589 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 MRPL12P52815 198 aaKnown RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 PRPF40BQ6NWY9 871 aaKnown RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 XAGE2Q96GT9 111 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 CYP19A1P11511 503 aaPredicted RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 JAG2Q9Y219 1238 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 ZNF142P52746 1687 aaPredicted RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 GRAPQ13588 217 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 TNNI3KQ59H18 835 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 SULF1Q8IWU6 871 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 GRAPLQ8TC17 118 aaPredicted RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 ZNF594Q96JF6 807 aaPredicted RBP6.03□□□□□ -1.44
PHF3-210ENST00000509876 HMG20BQ9P0W2 317 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 FPGT-TNNI3KV9GXZ4 949 aa6.03□□□□□ -1.44
PHF3-210ENST00000509876 SLC4A8Q2Y0W8 1093 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms