RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 ZFATQ9P243 1243 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 SEPT3Q9UH03 358 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 STARD13Q9Y3M8 1113 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 HYAL3O43820 417 aaPredicted RBP4.37□□□□□ -1.71
SMN2-209ENST00000509805 MAP3K6O95382 1288 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 HOXB4P17483 251 aaPredicted RBP4.37□□□□□ -1.71
SMN2-209ENST00000509805 CDC25BP30305 580 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 CHRNA4P43681 627 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 SRPK2P78362 688 aaKnown RBP4.37□□□□□ -1.71
SMN2-209ENST00000509805 FAM69CQ0P6D2 419 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 RSPO4Q2I0M5 234 aaPredicted RBP4.37□□□□□ -1.71
SMN2-209ENST00000509805 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 WFDC8Q8IUA0 241 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 COL26A1Q96A83 441 aa4.37□□□□□ -1.71
SMN2-209ENST00000509805 TLR7Q9NYK1 1049 aaKnown RBP4.37□□□□□ -1.71
SMN2-209ENST00000509805 LOC102724428A0A0B4J2F2 783 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 CARNS1A5YM72 827 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 MMP20O60882 483 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 AFF1P51825 1210 aaKnown RBP4.36□□□□□ -1.71
SMN2-209ENST00000509805 SIK1P57059 783 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 GPLD1P80108 840 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 PERM1Q5SV97 790 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 ZNF438Q7Z4V0 828 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 NLRP13Q86W25 1043 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 ATCAYQ86WG3 371 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 NCAPG2Q86XI2 1143 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 GTF3C2Q8WUA4 911 aaPredicted RBP4.36□□□□□ -1.71
SMN2-209ENST00000509805 PLD4Q96BZ4 506 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 NAGPAQ9UK23 515 aa4.36□□□□□ -1.71
SMN2-209ENST00000509805 A0A0A0MRY4 1105 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 GRNP28799 593 aaKnown RBP4.35□□□□□ -1.71
SMN2-209ENST00000509805 NRLP54845 237 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 HYAL2Q12891 473 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 MTMR3Q13615 1198 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 NOM1Q5C9Z4 860 aaKnown RBP4.35□□□□□ -1.71
SMN2-209ENST00000509805 IL22RA1Q8N6P7 574 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 CCER1Q8TC90 406 aaPredicted RBP4.35□□□□□ -1.71
SMN2-209ENST00000509805 TRPM4Q8TD43 1214 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 EDEM1Q92611 657 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 NUDT16Q96DE0 195 aaKnown RBP4.35□□□□□ -1.71
SMN2-209ENST00000509805 C1orf115Q9H7X2 142 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 ANO2Q9NQ90 1003 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 PRDM6Q9NQX0 595 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 KCNMB2Q9Y691 235 aa4.35□□□□□ -1.71
SMN2-209ENST00000509805 ZBTB42B2RXF5 422 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 C9orf172C9J069 976 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 TNFRSF10BO14763 440 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 ZBTB39O15060 712 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 SMNDC1O75940 238 aaKnown RBP eCLIP4.34□□□□□ -1.71
SMN2-209ENST00000509805 RPLP1P05386 114 aaKnown RBP4.34□□□□□ -1.71
SMN2-209ENST00000509805 NID1P14543 1247 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 ELNP15502 786 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 NKAPLQ5M9Q1 402 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 CEP135Q66GS9 1140 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 MSL1Q68DK7 614 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 B4GALNT3Q6L9W6 998 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 SHISA2Q6UWI4 295 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 C20orf204Q6ZNR8 217 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 HELQQ8TDG4 1101 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 LACRTQ9GZZ8 138 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 C11orf16Q9NQ32 467 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 ABI2Q9NYB9 513 aaPredicted RBP4.34□□□□□ -1.71
SMN2-209ENST00000509805 TIMELESSQ9UNS1 1208 aa4.34□□□□□ -1.71
SMN2-209ENST00000509805 EGFRP00533 1210 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 MPSTP25325 297 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 NRG1Q02297 640 aaPredicted RBP4.33□□□□□ -1.72
SMN2-209ENST00000509805 TRIP4Q15650 581 aaPredicted RBP4.33□□□□□ -1.72
SMN2-209ENST00000509805 FAM26DQ5JW98 314 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 ALKBH2Q6NS38 261 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 MDFIQ99750 246 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 LPIN3Q9BQK8 851 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 ELP3Q9H9T3 547 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 FRRS1LQ9P0K9 344 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 KANSL3Q9P2N6 904 aa4.33□□□□□ -1.72
SMN2-209ENST00000509805 FAM13AO94988 1023 aa4.32□□□□□ -1.72
SMN2-209ENST00000509805 CES1P23141 567 aa4.32□□□□□ -1.72
SMN2-209ENST00000509805 EIF1AXP47813 144 aaKnown RBP4.32□□□□□ -1.72
SMN2-209ENST00000509805 ZNF211Q13398 564 aaPredicted RBP4.32□□□□□ -1.72
SMN2-209ENST00000509805 FAM117BQ6P1L5 589 aa4.32□□□□□ -1.72
SMN2-209ENST00000509805 FMR1NBQ8N0W7 255 aaPredicted RBP4.32□□□□□ -1.72
SMN2-209ENST00000509805 TMC1Q8TDI8 760 aa4.32□□□□□ -1.72
SMN2-209ENST00000509805 SLAIN2Q9P270 581 aa4.32□□□□□ -1.72
SMN2-209ENST00000509805 A6NHS1 94 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 LINC01387J3KSC0 135 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 DYRK3O43781 588 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 SSFA2P28290 1259 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 CABP4P57796 275 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 JAG1P78504 1218 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 ATP11AP98196 1134 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 GLYCTKQ8IVS8 523 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 OR13H1Q8NG92 308 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 TP53INP1Q96A56 240 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 POLIQ9UNA4 740 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 TRIM33Q9UPN9 1127 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 PPME1Q9Y570 386 aa4.31□□□□□ -1.72
SMN2-209ENST00000509805 TMEM88BA6NKF7 163 aa4.3□□□□□ -1.72
SMN2-209ENST00000509805 H3BRB1 525 aa4.3□□□□□ -1.72
SMN2-209ENST00000509805 PHACTR2O75167 634 aa4.3□□□□□ -1.72
SMN2-209ENST00000509805 PDGFAP04085 211 aa4.3□□□□□ -1.72
SMN2-209ENST00000509805 CYP2E1P05181 493 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms