RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
PTPN20-221ENST00000509599 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
PTPN20-221ENST00000509599 TTC5Q8N0Z6 440 aa13.15□□□□□ -0.3
PTPN20-221ENST00000509599 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
PTPN20-221ENST00000509599 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-221ENST00000509599 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
PTPN20-221ENST00000509599 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
PTPN20-221ENST00000509599 NUP98P52948 1817 aa13.15□□□□□ -0.3
PTPN20-221ENST00000509599 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
PTPN20-221ENST00000509599 GPR25O00155 361 aa13.14□□□□□ -0.31
PTPN20-221ENST00000509599 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
PTPN20-221ENST00000509599 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
PTPN20-221ENST00000509599 NIP7Q9Y221 180 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN20-221ENST00000509599 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
PTPN20-221ENST00000509599 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
PTPN20-221ENST00000509599 C2orf72A6NCS6 295 aa13.13□□□□□ -0.31
PTPN20-221ENST00000509599 EN2P19622 333 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-221ENST00000509599 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
PTPN20-221ENST00000509599 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
PTPN20-221ENST00000509599 RAD17O75943 681 aa13.12□□□□□ -0.31
PTPN20-221ENST00000509599 EGFRP00533 1210 aa13.12□□□□□ -0.31
PTPN20-221ENST00000509599 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-221ENST00000509599 INTS3Q68E01 1043 aaKnown RBP13.12□□□□□ -0.31
PTPN20-221ENST00000509599 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
PTPN20-221ENST00000509599 SAMD7Q7Z3H4 446 aa13.12□□□□□ -0.31
PTPN20-221ENST00000509599 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPN20-221ENST00000509599 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
PTPN20-221ENST00000509599 H0YGN5 161 aa13.11□□□□□ -0.31
PTPN20-221ENST00000509599 H7C1D1 291 aa13.11□□□□□ -0.31
PTPN20-221ENST00000509599 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-221ENST00000509599 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
PTPN20-221ENST00000509599 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
PTPN20-221ENST00000509599 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
PTPN20-221ENST00000509599 FKTNO75072 461 aa13.1□□□□□ -0.31
PTPN20-221ENST00000509599 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
PTPN20-221ENST00000509599 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
PTPN20-221ENST00000509599 YDJCA8MPS7 323 aa13.09□□□□□ -0.31
PTPN20-221ENST00000509599 GTF2E1P29083 439 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-221ENST00000509599 IL13P35225 146 aa13.09□□□□□ -0.31
PTPN20-221ENST00000509599 TNIP1Q15025 636 aa13.09□□□□□ -0.31
PTPN20-221ENST00000509599 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
PTPN20-221ENST00000509599 TBC1D10BQ4KMP7 808 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-221ENST00000509599 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
PTPN20-221ENST00000509599 NUTM1Q86Y26 1132 aa13.09□□□□□ -0.31
PTPN20-221ENST00000509599 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
PTPN20-221ENST00000509599 CRAMP1Q96RY5 1269 aa13.08□□□□□ -0.32
PTPN20-221ENST00000509599 RTFDC1Q9BY42 306 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-221ENST00000509599 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
PTPN20-221ENST00000509599 TAF1P21675 1872 aa13.08□□□□□ -0.32
PTPN20-221ENST00000509599 LAMB2P55268 1798 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 TM4SF4P48230 202 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 HLFQ16534 295 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
PTPN20-221ENST00000509599 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 KIAA2012Q0VF49 1180 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 OTOP1Q7RTM1 612 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 DPF2Q92785 391 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
PTPN20-221ENST00000509599 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
PTPN20-221ENST00000509599 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
PTPN20-221ENST00000509599 ZNF316A6NFI3 1004 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-221ENST00000509599 KCNQ3O43525 872 aa13.05□□□□□ -0.32
PTPN20-221ENST00000509599 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
PTPN20-221ENST00000509599 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
PTPN20-221ENST00000509599 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PTPN20-221ENST00000509599 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
PTPN20-221ENST00000509599 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-221ENST00000509599 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
PTPN20-221ENST00000509599 HMOX1P09601 288 aa13.04□□□□□ -0.32
PTPN20-221ENST00000509599 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
PTPN20-221ENST00000509599 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
PTPN20-221ENST00000509599 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
PTPN20-221ENST00000509599 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
PTPN20-221ENST00000509599 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
PTPN20-221ENST00000509599 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
PTPN20-221ENST00000509599 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
PTPN20-221ENST00000509599 LAMB1P07942 1786 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 ANKRD36CQ5JPF3 1778 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 PSMD14O00487 310 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 PPP1R37O75864 691 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 FKBP1BP68106 108 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 TEFQ10587 303 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
PTPN20-221ENST00000509599 DPP8Q6V1X1 898 aaPredicted RBP13.02□□□□□ -0.33
PTPN20-221ENST00000509599 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
PTPN20-221ENST00000509599 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
PTPN20-221ENST00000509599 PRO3102Q9H379 93 aa13.02□□□□□ -0.33
PTPN20-221ENST00000509599 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
PTPN20-221ENST00000509599 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
PTPN20-221ENST00000509599 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
PTPN20-221ENST00000509599 NUDT7P0C024 238 aa13.01□□□□□ -0.33
PTPN20-221ENST00000509599 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
PTPN20-221ENST00000509599 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms