RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 TBC1D16Q8TBP0 767 aa13.43□□□□□ -0.26
CYSTM1-203ENST00000509589 TRIM35Q9UPQ4 493 aa13.43□□□□□ -0.26
CYSTM1-203ENST00000509589 ZNF157P51786 506 aaPredicted RBP13.42□□□□□ -0.26
CYSTM1-203ENST00000509589 KIF4BQ2VIQ3 1234 aa13.42□□□□□ -0.26
CYSTM1-203ENST00000509589 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
CYSTM1-203ENST00000509589 DCPSQ96C86 337 aaKnown RBP13.42□□□□□ -0.26
CYSTM1-203ENST00000509589 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
CYSTM1-203ENST00000509589 TRPA1O75762 1119 aa13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 RPS12P25398 132 aaKnown RBP13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 C2orf69Q8N8R5 385 aa13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 RNF186Q9NXI6 227 aa13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 PSME4Q14997 1843 aa13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 MYH3P11055 1940 aa13.41□□□□□ -0.26
CYSTM1-203ENST00000509589 IRS4O14654 1257 aaPredicted RBP13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 SLC10A3P09131 477 aa13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 SOX10P56693 466 aa13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 RPS8P62241 208 aaKnown RBP13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 JARID2Q92833 1246 aaPredicted RBP13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 CDCA5Q96FF9 252 aa13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 EYA3Q99504 573 aa13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 SAGE1Q9NXZ1 904 aa13.4□□□□□ -0.26
CYSTM1-203ENST00000509589 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
CYSTM1-203ENST00000509589 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
CYSTM1-203ENST00000509589 CCDC102AQ96A19 550 aa13.39□□□□□ -0.27
CYSTM1-203ENST00000509589 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
CYSTM1-203ENST00000509589 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
CYSTM1-203ENST00000509589 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
CYSTM1-203ENST00000509589 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 UFL1O94874 794 aa13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 TRIM28Q13263 835 aaKnown RBP13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 ANGEL2Q5VTE6 544 aaKnown RBP13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 RASAL3Q86YV0 1011 aa13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 ZC3H12CQ9C0D7 883 aaKnown RBP13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
CYSTM1-203ENST00000509589 WTIPA6NIX2 430 aaPredicted RBP13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 HOXB7P09629 217 aa13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 SCARF1Q14162 830 aa13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 RALBP1Q15311 655 aa13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 HYPKQ9NX55 129 aa13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
CYSTM1-203ENST00000509589 G3V3G9 751 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 ZNF280AP59817 542 aaPredicted RBP13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 DCAF8Q5TAQ9 597 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 RUNDC1Q96C34 613 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 MBIPQ9NS73 344 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 ZNF609O15014 1411 aa13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 MYBBP1AQ9BQG0 1328 aaKnown RBP13.36□□□□□ -0.27
CYSTM1-203ENST00000509589 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
CYSTM1-203ENST00000509589 GMLQ99445 158 aa13.35□□□□□ -0.27
CYSTM1-203ENST00000509589 MYD88Q99836 296 aa13.35□□□□□ -0.27
CYSTM1-203ENST00000509589 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
CYSTM1-203ENST00000509589 ZNF646O15015 1829 aaPredicted RBP13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 AGBL3Q8NEM8 1001 aa13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 MYOZ2Q9NPC6 264 aa13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 PAPPA2Q9BXP8 1791 aa13.34□□□□□ -0.27
CYSTM1-203ENST00000509589 PCCAP05165 728 aaPredicted RBP13.33□□□□□ -0.28
CYSTM1-203ENST00000509589 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
CYSTM1-203ENST00000509589 CCDC152Q4G0S7 254 aa13.33□□□□□ -0.28
CYSTM1-203ENST00000509589 CTU1Q7Z7A3 348 aaKnown RBP13.33□□□□□ -0.28
CYSTM1-203ENST00000509589 UBE2Q2LH0YL09 131 aa13.32□□□□□ -0.28
CYSTM1-203ENST00000509589 PDE8AO60658 829 aa13.32□□□□□ -0.28
CYSTM1-203ENST00000509589 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
CYSTM1-203ENST00000509589 ZNF853P0CG23 659 aa13.32□□□□□ -0.28
CYSTM1-203ENST00000509589 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
CYSTM1-203ENST00000509589 XDHP47989 1333 aa13.32□□□□□ -0.28
CYSTM1-203ENST00000509589 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 FKBP1BP68106 108 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 FBXW7Q969H0 707 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 CWC25Q9NXE8 425 aaPredicted RBP13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 PITPNM2Q9BZ72 1349 aa13.31□□□□□ -0.28
CYSTM1-203ENST00000509589 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
CYSTM1-203ENST00000509589 C8orf58Q8NAV2 365 aa13.3□□□□□ -0.28
CYSTM1-203ENST00000509589 ZNF296Q8WUU4 475 aaPredicted RBP13.3□□□□□ -0.28
CYSTM1-203ENST00000509589 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.3□□□□□ -0.28
CYSTM1-203ENST00000509589 APAF1O14727 1248 aa13.29□□□□□ -0.28
CYSTM1-203ENST00000509589 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
CYSTM1-203ENST00000509589 CTSWP56202 376 aa13.29□□□□□ -0.28
CYSTM1-203ENST00000509589 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
CYSTM1-203ENST00000509589 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
CYSTM1-203ENST00000509589 MINPP1Q9UNW1 487 aa13.29□□□□□ -0.28
CYSTM1-203ENST00000509589 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms