RNA–Protein interactions for RNA: ENST00000509405.5

LINC00461-210, long intergenic non-protein coding RNA 461, human

TSL 4

Gene LINC00461, Length 511 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00461-210	ENST00000509405	PARP10	Q53GL7	1025 aa		11.38	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZGPAT	Q8N5A5	531 aa	Known RBP	11.38	□□□□□ -0.59
LINC00461-210	ENST00000509405	GRPEL1	Q9HAV7	217 aa		11.38	□□□□□ -0.59
LINC00461-210	ENST00000509405	PAG1	Q9NWQ8	432 aa		11.38	□□□□□ -0.59
LINC00461-210	ENST00000509405	PALLD	Q8WX93	1383 aa		11.38	□□□□□ -0.59
LINC00461-210	ENST00000509405	MED23	Q9ULK4	1368 aa		11.38	□□□□□ -0.59
LINC00461-210	ENST00000509405	TUBGCP6	Q96RT7	1819 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	UBR2	Q8IWV8	1755 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	TAF5L	O75529	589 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	IFIT1	P09914	478 aa	Known RBP	11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	HMGB2	P26583	209 aa	Known RBP	11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	DDB1	Q16531	1140 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	DNAJC10	Q8IXB1	793 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	DNAJC2	Q99543	621 aa	Known RBP	11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	LMBRD1	Q9NUN5	540 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	PAPPA	Q13219	1627 aa		11.37	□□□□□ -0.59
LINC00461-210	ENST00000509405	RNF113A	O15541	343 aa	Known RBP	11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	STX6	O43752	255 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	PDE8A	O60658	829 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	PRPF40A	O75400	957 aa	Known RBP	11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZSCAN22	P10073	491 aa	Predicted RBP	11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	CYP19A1	P11511	503 aa	Predicted RBP	11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	RPS6KB1	P23443	525 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	PTH1R	Q03431	593 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	TTC39A	Q5SRH9	613 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	BARGIN	Q6ZT62	677 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	ATG9A	Q7Z3C6	839 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	DEFB132	Q7Z7B7	95 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	RASEF	Q8IZ41	740 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	TMEM87A	Q8NBN3	555 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	KLHDC4	Q8TBB5	520 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	FAM227B	Q96M60	508 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	NEK1	Q96PY6	1258 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	DBNDD2	Q9BQY9	259 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	ASAP1	Q9ULH1	1129 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZNF652	Q9Y2D9	606 aa		11.36	□□□□□ -0.59
LINC00461-210	ENST00000509405	SPATA31A1	Q5TZJ5	1347 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	TNS1	Q9HBL0	1735 aa	Known RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405		A0A1B0GUL7	405 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	UQCRFS1P1	P0C7P4	283 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	PIP4K2A	P48426	406 aa	Predicted RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	FGD1	P98174	961 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	SF3B2	Q13435	895 aa	Known RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	TRIM44	Q96DX7	344 aa	Predicted RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	ARX	Q96QS3	562 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	LLPH	Q9BRT6	129 aa	Known RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	TLR7	Q9NYK1	1049 aa	Known RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	ARFGEF2	Q9Y6D5	1785 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	AK9	Q5TCS8	1911 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405	MROH5	Q6ZUA9	1318 aa		11.35	□□□□□ -0.59
LINC00461-210	ENST00000509405		A0A0D9SFI3	127 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	CTSW	P56202	376 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	METTL24	Q5JXM2	366 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZMYM1	Q5SVZ6	1142 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	LDHAL6A	Q6ZMR3	332 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	NLRP10	Q86W26	655 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	DZIP3	Q86Y13	1208 aa	Known RBP	11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	FAM43A	Q8N2R8	423 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	FAM184A	Q8NB25	1140 aa		11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	TRMT112	Q9UI30	125 aa	Known RBP	11.34	□□□□□ -0.59
LINC00461-210	ENST00000509405	GOLIM4	O00461	696 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	IRS4	O14654	1257 aa	Predicted RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	DHX16	O60231	1041 aa	Known RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	ONECUT3	O60422	494 aa	Predicted RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	XRCC6	P12956	609 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	UBE2H	P62256	183 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	HMGN5	P82970	282 aa	Known RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	CCDC173	Q0VFZ6	552 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	NOL8	Q76FK4	1167 aa	Known RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	DHX32	Q7L7V1	743 aa	Known RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	RGS22	Q8NE09	1264 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	SYTL4	Q96C24	671 aa	Predicted RBP	11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	CNNM1	Q9NRU3	951 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	CCDC87	Q9NVE4	849 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	TBC1D2B	Q9UPU7	963 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	ZDHHC9	Q9Y397	364 aa		11.33	□□□□□ -0.6
LINC00461-210	ENST00000509405	SYT1	P21579	422 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	GJB2	P29033	226 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	PRIM1	P49642	420 aa	Known RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	ATP2B3	Q16720	1220 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	IMMT	Q16891	758 aa	Known RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	ZSCAN23	Q3MJ62	389 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	LARP1B	Q659C4	914 aa	Known RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	ATL3	Q6DD88	541 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	CAVIN1	Q6NZI2	390 aa	Known RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	CLEC4G	Q6UXB4	293 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	FBXL16	Q8N461	479 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	UTP14A	Q9BVJ6	771 aa	Known RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	IL25	Q9H293	177 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	ZNF609	O15014	1411 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	AFDN	P55196	1824 aa	Known RBP	11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	SPEF2	Q9C093	1822 aa		11.32	□□□□□ -0.6
LINC00461-210	ENST00000509405	F13A1	P00488	732 aa		11.31	□□□□□ -0.6
LINC00461-210	ENST00000509405	ITGA6	P23229	1130 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms