RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PSMD14O00487 310 aa18.72■□□□□ 0.59
HMGCL-208ENST00000509389 PAXIP1Q6ZW49 1069 aaPredicted RBP18.72■□□□□ 0.59
HMGCL-208ENST00000509389 MICALL2Q8IY33 904 aa18.72■□□□□ 0.59
HMGCL-208ENST00000509389 DPF2Q92785 391 aa18.72■□□□□ 0.59
HMGCL-208ENST00000509389 TSR2Q969E8 191 aaKnown RBP18.72■□□□□ 0.59
HMGCL-208ENST00000509389 CAPNS2Q96L46 248 aa18.72■□□□□ 0.59
HMGCL-208ENST00000509389 GPR101Q96P66 508 aaPredicted RBP18.72■□□□□ 0.59
HMGCL-208ENST00000509389 THSD7BQ9C0I4 1608 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 ECE2O60344 883 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 PDE8AO60658 829 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 MAP2K1Q02750 393 aaPredicted RBP18.71■□□□□ 0.59
HMGCL-208ENST00000509389 DOK7Q18PE1 504 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 CCDC152Q4G0S7 254 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 CYP4F22Q6NT55 531 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 KCNQ5Q9NR82 932 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
HMGCL-208ENST00000509389 CELF2O95319 508 aaKnown RBP18.7■□□□□ 0.58
HMGCL-208ENST00000509389 ECE1P42892 770 aa18.7■□□□□ 0.58
HMGCL-208ENST00000509389 LBX1P52954 281 aa18.7■□□□□ 0.58
HMGCL-208ENST00000509389 CCDC85AQ96PX6 553 aaPredicted RBP18.7■□□□□ 0.58
HMGCL-208ENST00000509389 SCN9AQ15858 1988 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 GRM1Q13255 1194 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 KSR2Q6VAB6 950 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 CDC37L1Q7L3B6 337 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 SAMD7Q7Z3H4 446 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 WWC1Q8IX03 1113 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
HMGCL-208ENST00000509389 RTL9Q8NET4 1388 aa18.69■□□□□ 0.58
HMGCL-208ENST00000509389 PI4KAP2A4QPH2 592 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 IGKV5-2P06315 115 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 HSPA8P11142 646 aaKnown RBP18.68■□□□□ 0.58
HMGCL-208ENST00000509389 SAPCD2Q86UD0 394 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 PI4KAP1Q8N8J0 262 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 POLR2AP24928 1970 aaKnown RBP18.68■□□□□ 0.58
HMGCL-208ENST00000509389 UFL1O94874 794 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 RPS12P25398 132 aaKnown RBP18.68■□□□□ 0.58
HMGCL-208ENST00000509389 TBC1D10BQ4KMP7 808 aaPredicted RBP18.68■□□□□ 0.58
HMGCL-208ENST00000509389 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 ZNF408Q9H9D4 720 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 GGA1Q9UJY5 639 aa18.68■□□□□ 0.58
HMGCL-208ENST00000509389 EGFRP00533 1210 aa18.67■□□□□ 0.58
HMGCL-208ENST00000509389 TWISTNBQ3B726 338 aaPredicted RBP18.67■□□□□ 0.58
HMGCL-208ENST00000509389 USP48Q86UV5 1035 aa18.67■□□□□ 0.58
HMGCL-208ENST00000509389 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
HMGCL-208ENST00000509389 TRMT2AQ8IZ69 625 aaKnown RBP18.67■□□□□ 0.58
HMGCL-208ENST00000509389 MYH3P11055 1940 aa18.66■□□□□ 0.58
HMGCL-208ENST00000509389 AOC2O75106 756 aa18.66■□□□□ 0.58
HMGCL-208ENST00000509389 G2E3Q7L622 706 aa18.66■□□□□ 0.58
HMGCL-208ENST00000509389 IL16Q14005 1332 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 G3V3G9 751 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
HMGCL-208ENST00000509389 CTSWP56202 376 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 RBM26Q5T8P6 1007 aaKnown RBP18.65■□□□□ 0.58
HMGCL-208ENST00000509389 DCAF8Q5TAQ9 597 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 DLK2Q6UY11 383 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 HHIPL1Q96JK4 782 aa18.65■□□□□ 0.58
HMGCL-208ENST00000509389 XDHP47989 1333 aa18.64■□□□□ 0.57
HMGCL-208ENST00000509389 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
HMGCL-208ENST00000509389 MAP2K2P36507 400 aa18.64■□□□□ 0.57
HMGCL-208ENST00000509389 CWF19L2Q2TBE0 894 aaKnown RBP18.64■□□□□ 0.57
HMGCL-208ENST00000509389 TTLL11Q8NHH1 800 aa18.64■□□□□ 0.57
HMGCL-208ENST00000509389 PSME4Q14997 1843 aa18.63■□□□□ 0.57
HMGCL-208ENST00000509389 SPEF2Q9C093 1822 aa18.63■□□□□ 0.57
HMGCL-208ENST00000509389 NEURL1BA8MQ27 555 aa18.63■□□□□ 0.57
HMGCL-208ENST00000509389 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
HMGCL-208ENST00000509389 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
HMGCL-208ENST00000509389 BEGAINQ9BUH8 593 aa18.63■□□□□ 0.57
HMGCL-208ENST00000509389 ATP2B4P23634 1241 aa18.62■□□□□ 0.57
HMGCL-208ENST00000509389 KIF4BQ2VIQ3 1234 aa18.62■□□□□ 0.57
HMGCL-208ENST00000509389 KRT26Q7Z3Y9 468 aa18.62■□□□□ 0.57
HMGCL-208ENST00000509389 GREM2Q9H772 168 aa18.62■□□□□ 0.57
HMGCL-208ENST00000509389 H7C1W4 665 aa18.61■□□□□ 0.57
HMGCL-208ENST00000509389 SLFN5Q08AF3 891 aa18.61■□□□□ 0.57
HMGCL-208ENST00000509389 RSBN1LQ6PCB5 846 aaPredicted RBP18.61■□□□□ 0.57
HMGCL-208ENST00000509389 DCPSQ96C86 337 aaKnown RBP18.61■□□□□ 0.57
HMGCL-208ENST00000509389 BSDC1Q9NW68 430 aaPredicted RBP18.61■□□□□ 0.57
HMGCL-208ENST00000509389 CACNA1FO60840 1977 aa18.61■□□□□ 0.57
HMGCL-208ENST00000509389 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
HMGCL-208ENST00000509389 ADM5C9JUS6 153 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 ZNF609O15014 1411 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 UBE3BQ7Z3V4 1068 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 AGBL3Q8NEM8 1001 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 MINPP1Q9UNW1 487 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
HMGCL-208ENST00000509389 HUNKP57058 714 aa18.59■□□□□ 0.57
HMGCL-208ENST00000509389 FLIIQ13045 1269 aa18.59■□□□□ 0.57
HMGCL-208ENST00000509389 SALL2Q9Y467 1007 aaPredicted RBP18.59■□□□□ 0.57
HMGCL-208ENST00000509389 ASTN2O75129 1339 aaPredicted RBP18.59■□□□□ 0.57
HMGCL-208ENST00000509389 ZNF280AP59817 542 aaPredicted RBP18.58■□□□□ 0.57
HMGCL-208ENST00000509389 GCKRQ14397 625 aa18.58■□□□□ 0.57
HMGCL-208ENST00000509389 PODNQ7Z5L7 613 aa18.58■□□□□ 0.57
HMGCL-208ENST00000509389 GMLQ99445 158 aa18.58■□□□□ 0.57
HMGCL-208ENST00000509389 GGA3Q9NZ52 723 aa18.58■□□□□ 0.57
HMGCL-208ENST00000509389 TSKSQ9UJT2 592 aa18.58■□□□□ 0.57
HMGCL-208ENST00000509389 USP17L3A6NCW0 530 aa18.57■□□□□ 0.56
HMGCL-208ENST00000509389 USP17L4A6NCW7 530 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms