RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 BSDC1Q9NW68 430 aaPredicted RBP23.65■■□□□ 1.38
UBE3D-207ENST00000509102 GPRC5DQ9NZD1 345 aa23.65■■□□□ 1.38
UBE3D-207ENST00000509102 ATP2B4P23634 1241 aa23.64■■□□□ 1.37
UBE3D-207ENST00000509102 EPS15P42566 896 aa23.64■■□□□ 1.37
UBE3D-207ENST00000509102 GMPSP49915 693 aaPredicted RBP23.64■■□□□ 1.37
UBE3D-207ENST00000509102 DNAJC5GQ8N7S2 189 aa23.64■■□□□ 1.37
UBE3D-207ENST00000509102 KLRG1Q96E93 195 aa23.64■■□□□ 1.37
UBE3D-207ENST00000509102 DBNDD1Q9H9R9 158 aa23.64■■□□□ 1.37
UBE3D-207ENST00000509102 ADARB2Q9NS39 739 aaKnown RBP23.64■■□□□ 1.37
UBE3D-207ENST00000509102 C9orf78Q9NZ63 289 aaPredicted RBP23.64■■□□□ 1.37
UBE3D-207ENST00000509102 COL4A1P02462 1669 aa23.64■■□□□ 1.37
UBE3D-207ENST00000509102 ECE2O60344 883 aa23.63■■□□□ 1.37
UBE3D-207ENST00000509102 ALDH1L1O75891 902 aa23.63■■□□□ 1.37
UBE3D-207ENST00000509102 MPHOSPH8Q99549 860 aa23.63■■□□□ 1.37
UBE3D-207ENST00000509102 SRCIN1Q9C0H9 1055 aa23.63■■□□□ 1.37
UBE3D-207ENST00000509102 GRM8O00222 908 aa23.62■■□□□ 1.37
UBE3D-207ENST00000509102 ITGA6P23229 1130 aa23.62■■□□□ 1.37
UBE3D-207ENST00000509102 CASP7P55210 303 aa23.62■■□□□ 1.37
UBE3D-207ENST00000509102 CREBZFQ9NS37 354 aa23.62■■□□□ 1.37
UBE3D-207ENST00000509102 LTBP1Q14766 1721 aa23.62■■□□□ 1.37
UBE3D-207ENST00000509102 PTPRCP08575 1304 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 ANKRD18BA2A2Z9 1011 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 YDJCA8MPS7 323 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 DOK7Q18PE1 504 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
UBE3D-207ENST00000509102 CNTROBQ8N137 903 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 CHMP3Q9Y3E7 222 aa23.61■■□□□ 1.37
UBE3D-207ENST00000509102 H7C1D1 291 aa23.6■■□□□ 1.37
UBE3D-207ENST00000509102 CSF1RP07333 972 aa23.6■■□□□ 1.37
UBE3D-207ENST00000509102 MAP1SQ66K74 1059 aaPredicted RBP23.6■■□□□ 1.37
UBE3D-207ENST00000509102 GPR101Q96P66 508 aaPredicted RBP23.6■■□□□ 1.37
UBE3D-207ENST00000509102 MINPP1Q9UNW1 487 aa23.6■■□□□ 1.37
UBE3D-207ENST00000509102 CT47B1P0C2W7 299 aaPredicted RBP23.59■■□□□ 1.37
UBE3D-207ENST00000509102 RPS12P25398 132 aaKnown RBP23.59■■□□□ 1.37
UBE3D-207ENST00000509102 IFIT5Q13325 482 aaKnown RBP23.59■■□□□ 1.37
UBE3D-207ENST00000509102 MRPL50Q8N5N7 158 aaKnown RBP23.59■■□□□ 1.37
UBE3D-207ENST00000509102 ANKRD2Q9GZV1 360 aa23.59■■□□□ 1.37
UBE3D-207ENST00000509102 ADAMTSL1Q8N6G6 1762 aa23.59■■□□□ 1.37
UBE3D-207ENST00000509102 PASKQ96RG2 1323 aa23.59■■□□□ 1.37
UBE3D-207ENST00000509102 PSMD14O00487 310 aa23.58■■□□□ 1.37
UBE3D-207ENST00000509102 ALDH1L2Q3SY69 923 aa23.58■■□□□ 1.37
UBE3D-207ENST00000509102 DPF2Q92785 391 aa23.58■■□□□ 1.37
UBE3D-207ENST00000509102 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.37
UBE3D-207ENST00000509102 CNOT7Q9UIV1 285 aaKnown RBP23.58■■□□□ 1.37
UBE3D-207ENST00000509102 ITGBL1O95965 494 aaPredicted RBP23.57■■□□□ 1.36
UBE3D-207ENST00000509102 SSH1Q8WYL5 1049 aa23.57■■□□□ 1.36
UBE3D-207ENST00000509102 TMEM88BA6NKF7 163 aa23.56■■□□□ 1.36
UBE3D-207ENST00000509102 KCNJ4P48050 445 aa23.56■■□□□ 1.36
UBE3D-207ENST00000509102 CCT4P50991 539 aaKnown RBP23.56■■□□□ 1.36
UBE3D-207ENST00000509102 CCDC57Q2TAC2 916 aa23.56■■□□□ 1.36
UBE3D-207ENST00000509102 TAF7LQ5H9L4 462 aa23.56■■□□□ 1.36
UBE3D-207ENST00000509102 SMC4Q9NTJ3 1288 aa23.56■■□□□ 1.36
UBE3D-207ENST00000509102 LEMD3Q9Y2U8 911 aa23.56■■□□□ 1.36
UBE3D-207ENST00000509102 MED23Q9ULK4 1368 aa23.55■■□□□ 1.36
UBE3D-207ENST00000509102 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
UBE3D-207ENST00000509102 PODNQ7Z5L7 613 aa23.55■■□□□ 1.36
UBE3D-207ENST00000509102 MICALL2Q8IY33 904 aa23.55■■□□□ 1.36
UBE3D-207ENST00000509102 ZBTB12Q9Y330 459 aaPredicted RBP23.55■■□□□ 1.36
UBE3D-207ENST00000509102 FOXO4P98177 505 aa23.54■■□□□ 1.36
UBE3D-207ENST00000509102 LMBR1LQ6UX01 489 aa23.54■■□□□ 1.36
UBE3D-207ENST00000509102 TRMT2AQ8IZ69 625 aaKnown RBP23.54■■□□□ 1.36
UBE3D-207ENST00000509102 ZC3H15Q8WU90 426 aaKnown RBP23.54■■□□□ 1.36
UBE3D-207ENST00000509102 JMYQ8N9B5 988 aa23.53■■□□□ 1.36
UBE3D-207ENST00000509102 VIL1P09327 827 aaKnown RBP23.52■■□□□ 1.36
UBE3D-207ENST00000509102 ZNF804BA4D1E1 1349 aa23.52■■□□□ 1.36
UBE3D-207ENST00000509102 KCNQ5Q9NR82 932 aa23.51■■□□□ 1.35
UBE3D-207ENST00000509102 USP17L3A6NCW0 530 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 USP17L4A6NCW7 530 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 CHRNDQ07001 517 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 USP17L1Q7RTZ2 530 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 MIER1Q8N108 512 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 AGBL3Q8NEM8 1001 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 COA1Q9GZY4 146 aa23.5■■□□□ 1.35
UBE3D-207ENST00000509102 MKRN1Q9UHC7 482 aaKnown RBP23.5■■□□□ 1.35
UBE3D-207ENST00000509102 RSBN1LQ6PCB5 846 aaPredicted RBP23.49■■□□□ 1.35
UBE3D-207ENST00000509102 LDHAL6AQ6ZMR3 332 aa23.49■■□□□ 1.35
UBE3D-207ENST00000509102 TRPM4Q8TD43 1214 aa23.49■■□□□ 1.35
UBE3D-207ENST00000509102 CNNM1Q9NRU3 951 aa23.49■■□□□ 1.35
UBE3D-207ENST00000509102 EPHA10Q5JZY3 1008 aa23.48■■□□□ 1.35
UBE3D-207ENST00000509102 PGAP2Q9UHJ9 254 aa23.48■■□□□ 1.35
UBE3D-207ENST00000509102 ABT1Q9ULW3 272 aaKnown RBP23.48■■□□□ 1.35
UBE3D-207ENST00000509102 UTYO14607 1347 aa23.48■■□□□ 1.35
UBE3D-207ENST00000509102 NBPF7P0C2Y1 421 aaPredicted RBP23.47■■□□□ 1.35
UBE3D-207ENST00000509102 TBC1D10BQ4KMP7 808 aaPredicted RBP23.47■■□□□ 1.35
UBE3D-207ENST00000509102 CDC37L1Q7L3B6 337 aa23.47■■□□□ 1.35
UBE3D-207ENST00000509102 SAMD7Q7Z3H4 446 aa23.47■■□□□ 1.35
UBE3D-207ENST00000509102 FBXW7Q969H0 707 aa23.47■■□□□ 1.35
UBE3D-207ENST00000509102 SUCLG2Q96I99 432 aa23.47■■□□□ 1.35
UBE3D-207ENST00000509102 CNTNAP1P78357 1384 aa23.47■■□□□ 1.35
UBE3D-207ENST00000509102 SHTN1A0MZ66 631 aa23.46■■□□□ 1.35
UBE3D-207ENST00000509102 HIRAP54198 1017 aaPredicted RBP23.46■■□□□ 1.35
UBE3D-207ENST00000509102 RBM26Q5T8P6 1007 aaKnown RBP23.46■■□□□ 1.35
UBE3D-207ENST00000509102 API5Q9BZZ5 524 aaKnown RBP23.46■■□□□ 1.35
UBE3D-207ENST00000509102 ZNF609O15014 1411 aa23.45■■□□□ 1.34
UBE3D-207ENST00000509102 MYO3BQ8WXR4 1341 aa23.45■■□□□ 1.34
UBE3D-207ENST00000509102 KIF4BQ2VIQ3 1234 aa23.45■■□□□ 1.34
UBE3D-207ENST00000509102 DCPSQ96C86 337 aaKnown RBP23.45■■□□□ 1.34
UBE3D-207ENST00000509102 SCN9AQ15858 1988 aa23.45■■□□□ 1.34
UBE3D-207ENST00000509102 KIF16BQ96L93 1317 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms