RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 MIEF2Q96C03 454 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 BEND6Q5SZJ8 279 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 TSHZ3Q63HK5 1081 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 TRAK1Q9UPV9 953 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
PDGFRA-207ENST00000509092 EFCAB6Q5THR3 1501 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 KLHL33A6NCF5 533 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 ELL2O00472 640 aaPredicted RBP11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 PDCP20941 246 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 USP5P45974 858 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 BIRC2Q13490 618 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 MCM6Q14566 821 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 TMC6Q7Z403 805 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 FAXDC2Q96IV6 333 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 PGBD1Q96JS3 809 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 UTP14AQ9BVJ6 771 aaKnown RBP11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 BICC1Q9H694 974 aaKnown RBP11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 ANO10Q9NW15 660 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 MYH15Q9Y2K3 1946 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 ABCC3O15438 1527 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 ERCC3P19447 782 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 KIF1BO60333 1816 aa11.6□□□□□ -0.55
PDGFRA-207ENST00000509092 N4BP1O75113 896 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 FCHSD2O94868 740 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 ELF1P32519 619 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 LIG3P49916 1009 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 NEDD9Q14511 834 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 HSP90B2PQ58FF3 399 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 FCHSD1Q86WN1 690 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 AOPEPQ8N6M6 819 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 DDX11Q96FC9 970 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 IL25Q9H293 177 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 BSDC1Q9NW68 430 aaPredicted RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 STAP2Q9UGK3 403 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 AOX1Q06278 1338 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 DIAPH1O60610 1272 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 ERLIN1O75477 346 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 IRX1P78414 480 aaPredicted RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 ST3GAL1Q11201 340 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 SEMA3FQ13275 785 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 KRT24Q2M2I5 525 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 NBPF10Q6P3W6 841 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 NAT10Q9H0A0 1025 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 PLEKHA4Q9H4M7 779 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 MCM8Q9UJA3 840 aa11.59□□□□□ -0.55
PDGFRA-207ENST00000509092 H0YHG0 523 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 EXOC5O00471 708 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 GIGYF1O75420 1035 aaPredicted RBP11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 GPTP24298 496 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 DDR1Q08345 913 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 FBXW10Q5XX13 1052 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 CPLX2Q6PUV4 134 aaKnown RBP11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 FAM43BQ6ZT52 329 aaPredicted RBP11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 MEIS3Q99687 375 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 RAB21Q9UL25 225 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 SH3BP1Q9Y3L3 701 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 CAMSAP1Q5T5Y3 1602 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 NFE2L2Q16236 605 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 XPO4Q9C0E2 1151 aaKnown RBP11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 L1RE1Q9UN81 338 aa11.58□□□□□ -0.56
PDGFRA-207ENST00000509092 ADCY9O60503 1353 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 IFIT2P09913 472 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 SSR1P43307 286 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 SCRN1Q12765 414 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 UNC5CLQ8IV45 518 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 PRPF38AQ8NAV1 312 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 LSG1Q9H089 658 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 FAM204AQ9H8W3 233 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 VWA3AA6NCI4 1184 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 GOLGA6L9A6NEM1 432 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 NBPF9Q3BBW0 867 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 FMNL3Q8IVF7 1028 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 TEX11Q8IYF3 940 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 MSANTD4Q8NCY6 345 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 JPH2Q9BR39 696 aaPredicted RBP11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 ADGRF5Q8IZF2 1346 aa11.57□□□□□ -0.56
PDGFRA-207ENST00000509092 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
PDGFRA-207ENST00000509092 CLTCQ00610 1675 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms