RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 LRP8Q14114 963 aa9.46□□□□□ -0.9
LINC01088-205ENST00000509088 SETDB1Q15047 1291 aa9.46□□□□□ -0.9
LINC01088-205ENST00000509088 TMEM164Q5U3C3 297 aa9.46□□□□□ -0.9
LINC01088-205ENST00000509088 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
LINC01088-205ENST00000509088 TRIM33Q9UPN9 1127 aa9.46□□□□□ -0.9
LINC01088-205ENST00000509088 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
LINC01088-205ENST00000509088 GDF6Q6KF10 455 aaPredicted RBP9.45□□□□□ -0.9
LINC01088-205ENST00000509088 ADAMTSL4Q6UY14 1074 aa9.45□□□□□ -0.9
LINC01088-205ENST00000509088 DZIP1LQ8IYY4 767 aaKnown RBP9.45□□□□□ -0.9
LINC01088-205ENST00000509088 MKNK1Q9BUB5 465 aa9.45□□□□□ -0.9
LINC01088-205ENST00000509088 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
LINC01088-205ENST00000509088 KRTAP9-6A0A140TA67 174 aa9.44□□□□□ -0.9
LINC01088-205ENST00000509088 TM4SF5O14894 197 aa9.44□□□□□ -0.9
LINC01088-205ENST00000509088 ALX3O95076 343 aa9.44□□□□□ -0.9
LINC01088-205ENST00000509088 ATG7O95352 703 aa9.44□□□□□ -0.9
LINC01088-205ENST00000509088 IL22RA1Q8N6P7 574 aa9.44□□□□□ -0.9
LINC01088-205ENST00000509088 OR13H1Q8NG92 308 aa9.44□□□□□ -0.9
LINC01088-205ENST00000509088 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
LINC01088-205ENST00000509088 ZBTB39O15060 712 aa9.43□□□□□ -0.9
LINC01088-205ENST00000509088 HYAL3O43820 417 aaPredicted RBP9.43□□□□□ -0.9
LINC01088-205ENST00000509088 NAA30Q147X3 362 aaPredicted RBP9.43□□□□□ -0.9
LINC01088-205ENST00000509088 PRR23CQ6ZRP0 262 aa9.43□□□□□ -0.9
LINC01088-205ENST00000509088 Q6ZS46 218 aa9.43□□□□□ -0.9
LINC01088-205ENST00000509088 GHRHP01286 108 aa9.42□□□□□ -0.9
LINC01088-205ENST00000509088 TMEM130Q8N3G9 435 aa9.42□□□□□ -0.9
LINC01088-205ENST00000509088 AKTIPQ9H8T0 292 aa9.42□□□□□ -0.9
LINC01088-205ENST00000509088 UBAP1LF5GYI3 381 aa9.41□□□□□ -0.9
LINC01088-205ENST00000509088 ATP11AP98196 1134 aa9.41□□□□□ -0.9
LINC01088-205ENST00000509088 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
LINC01088-205ENST00000509088 ZAP70P43403 619 aa9.4□□□□□ -0.9
LINC01088-205ENST00000509088 GALNT11Q8NCW6 608 aa9.4□□□□□ -0.9
LINC01088-205ENST00000509088 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
LINC01088-205ENST00000509088 SRA1Q9HD15 236 aaKnown RBP9.4□□□□□ -0.9
LINC01088-205ENST00000509088 PTCD1O75127 700 aaKnown RBP9.38□□□□□ -0.91
LINC01088-205ENST00000509088 AGGF1Q8N302 714 aaeCLIP9.38□□□□□ -0.91
LINC01088-205ENST00000509088 GPR152Q8TDT2 470 aa9.38□□□□□ -0.91
LINC01088-205ENST00000509088 PIK3R5Q8WYR1 880 aa9.38□□□□□ -0.91
LINC01088-205ENST00000509088 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
LINC01088-205ENST00000509088 KIF4AO95239 1232 aa9.37□□□□□ -0.91
LINC01088-205ENST00000509088 WISP1O95388 367 aa9.37□□□□□ -0.91
LINC01088-205ENST00000509088 CYP2E1P05181 493 aaPredicted RBP9.37□□□□□ -0.91
LINC01088-205ENST00000509088 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.37□□□□□ -0.91
LINC01088-205ENST00000509088 MAP4K3Q8IVH8 894 aa9.37□□□□□ -0.91
LINC01088-205ENST00000509088 RBSNQ9H1K0 784 aa9.37□□□□□ -0.91
LINC01088-205ENST00000509088 STIM2Q9P246 746 aa9.37□□□□□ -0.91
LINC01088-205ENST00000509088 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.37□□□□□ -0.91
LINC01088-205ENST00000509088 RASSF4Q9H2L5 321 aa9.36□□□□□ -0.91
LINC01088-205ENST00000509088 KCNK4Q9NYG8 393 aa9.36□□□□□ -0.91
LINC01088-205ENST00000509088 SEPT3Q9UH03 358 aa9.36□□□□□ -0.91
LINC01088-205ENST00000509088 PPME1Q9Y570 386 aa9.36□□□□□ -0.91
LINC01088-205ENST00000509088 HYAL2Q12891 473 aa9.35□□□□□ -0.91
LINC01088-205ENST00000509088 TXNDC11Q6PKC3 985 aa9.35□□□□□ -0.91
LINC01088-205ENST00000509088 LINC01387J3KSC0 135 aa9.34□□□□□ -0.91
LINC01088-205ENST00000509088 FSTP19883 344 aa9.34□□□□□ -0.91
LINC01088-205ENST00000509088 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
LINC01088-205ENST00000509088 NBPF11Q86T75 865 aa9.34□□□□□ -0.91
LINC01088-205ENST00000509088 CACTIN-AS1Q8N1I8 211 aa9.34□□□□□ -0.91
LINC01088-205ENST00000509088 UBL7Q96S82 380 aaPredicted RBP9.34□□□□□ -0.91
LINC01088-205ENST00000509088 ABI2Q9NYB9 513 aaPredicted RBP9.34□□□□□ -0.91
LINC01088-205ENST00000509088 FAM13BQ9NYF5 915 aa9.34□□□□□ -0.91
LINC01088-205ENST00000509088 CEP120Q8N960 986 aa9.33□□□□□ -0.92
LINC01088-205ENST00000509088 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
LINC01088-205ENST00000509088 LACRTQ9GZZ8 138 aa9.33□□□□□ -0.92
LINC01088-205ENST00000509088 MUC3BQ9H195 1237 aa9.33□□□□□ -0.92
LINC01088-205ENST00000509088 TMEM63CQ9P1W3 806 aa9.33□□□□□ -0.92
LINC01088-205ENST00000509088 ATCAYQ86WG3 371 aa9.32□□□□□ -0.92
LINC01088-205ENST00000509088 KRTAP4-12Q9BQ66 201 aa9.32□□□□□ -0.92
LINC01088-205ENST00000509088 TIMELESSQ9UNS1 1208 aa9.32□□□□□ -0.92
LINC01088-205ENST00000509088 EPHA1P21709 976 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 ATP2B4P23634 1241 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 TTC39BQ5VTQ0 682 aaPredicted RBP9.31□□□□□ -0.92
LINC01088-205ENST00000509088 ARMC10Q8N2F6 343 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 PBX4Q9BYU1 374 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 CNTN3Q9P232 1028 aa9.31□□□□□ -0.92
LINC01088-205ENST00000509088 FNDC3AQ9Y2H6 1198 aaKnown RBP9.31□□□□□ -0.92
LINC01088-205ENST00000509088 ADAM11O75078 769 aa9.3□□□□□ -0.92
LINC01088-205ENST00000509088 ACPPP15309 386 aa9.3□□□□□ -0.92
LINC01088-205ENST00000509088 GLB1P16278 677 aa9.3□□□□□ -0.92
LINC01088-205ENST00000509088 CDC27P30260 824 aa9.3□□□□□ -0.92
LINC01088-205ENST00000509088 SCNN1AP37088 669 aa9.3□□□□□ -0.92
LINC01088-205ENST00000509088 NUDT16Q96DE0 195 aaKnown RBP9.3□□□□□ -0.92
LINC01088-205ENST00000509088 SMNDC1O75940 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC01088-205ENST00000509088 CD68P34810 354 aaPredicted RBP9.29□□□□□ -0.92
LINC01088-205ENST00000509088 PDE12Q6L8Q7 609 aaKnown RBP9.29□□□□□ -0.92
LINC01088-205ENST00000509088 KIAA1211Q6ZU35 1233 aa9.29□□□□□ -0.92
LINC01088-205ENST00000509088 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
LINC01088-205ENST00000509088 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
LINC01088-205ENST00000509088 POP1Q99575 1024 aaKnown RBP9.29□□□□□ -0.92
LINC01088-205ENST00000509088 ELP3Q9H9T3 547 aa9.29□□□□□ -0.92
LINC01088-205ENST00000509088 SH2B1Q9NRF2 756 aaPredicted RBP9.29□□□□□ -0.92
LINC01088-205ENST00000509088 NFKBIEO00221 500 aa9.28□□□□□ -0.92
LINC01088-205ENST00000509088 FSCN2O14926 492 aa9.28□□□□□ -0.92
LINC01088-205ENST00000509088 CDC25BP30305 580 aa9.28□□□□□ -0.92
LINC01088-205ENST00000509088 SPACA7Q96KW9 195 aa9.28□□□□□ -0.92
LINC01088-205ENST00000509088 ADAM19Q9H013 955 aa9.28□□□□□ -0.92
LINC01088-205ENST00000509088 KANSL3Q9P2N6 904 aa9.28□□□□□ -0.92
LINC01088-205ENST00000509088 DDX3YO15523 660 aaKnown RBP9.27□□□□□ -0.93
LINC01088-205ENST00000509088 ACAD11Q709F0 780 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms