RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 KLRG1Q96E93 195 aa18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 GREM2Q9H772 168 aa18.88■□□□□ 0.61
UBE2D3-228ENST00000508974 H7C1W4 665 aa18.87■□□□□ 0.61
UBE2D3-228ENST00000508974 UFL1O94874 794 aa18.87■□□□□ 0.61
UBE2D3-228ENST00000508974 LINS1Q8NG48 757 aa18.87■□□□□ 0.61
UBE2D3-228ENST00000508974 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
UBE2D3-228ENST00000508974 CDC5LQ99459 802 aaKnown RBP18.86■□□□□ 0.61
UBE2D3-228ENST00000508974 EYA3Q99504 573 aa18.86■□□□□ 0.61
UBE2D3-228ENST00000508974 GPRC5DQ9NZD1 345 aa18.86■□□□□ 0.61
UBE2D3-228ENST00000508974 SCN9AQ15858 1988 aa18.86■□□□□ 0.61
UBE2D3-228ENST00000508974 ECE2O60344 883 aa18.85■□□□□ 0.61
UBE2D3-228ENST00000508974 TNIP1Q15025 636 aa18.85■□□□□ 0.61
UBE2D3-228ENST00000508974 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
UBE2D3-228ENST00000508974 GGA1Q9UJY5 639 aa18.85■□□□□ 0.61
UBE2D3-228ENST00000508974 PASKQ96RG2 1323 aa18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 SHTN1A0MZ66 631 aa18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 G3V3G9 751 aa18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 DCAF8Q5TAQ9 597 aa18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 ZC3H12CQ9C0D7 883 aaKnown RBP18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 KCNQ5Q9NR82 932 aa18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
UBE2D3-228ENST00000508974 PSMD14O00487 310 aa18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 ITGBL1O95965 494 aaPredicted RBP18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 CASP7P55210 303 aa18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 FAM161AQ3B820 660 aa18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 BEND3Q5T5X7 828 aa18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 CDCA7LQ96GN5 454 aa18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 PODXL2Q9NZ53 605 aa18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 MKRN1Q9UHC7 482 aaKnown RBP18.83■□□□□ 0.6
UBE2D3-228ENST00000508974 XDHP47989 1333 aa18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 WTIPA6NIX2 430 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 E9PSI1 815 aa18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 ITGA6P23229 1130 aa18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 USP50Q70EL3 339 aaPredicted RBP18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 CREBZFQ9NS37 354 aa18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 ADARB2Q9NS39 739 aaKnown RBP18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 PCNTO95613 3336 aa18.82■□□□□ 0.6
UBE2D3-228ENST00000508974 RTL9Q8NET4 1388 aa18.81■□□□□ 0.6
UBE2D3-228ENST00000508974 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
UBE2D3-228ENST00000508974 CNOT7Q9UIV1 285 aaKnown RBP18.81■□□□□ 0.6
UBE2D3-228ENST00000508974 CHMP3Q9Y3E7 222 aa18.81■□□□□ 0.6
UBE2D3-228ENST00000508974 PSME4Q14997 1843 aa18.81■□□□□ 0.6
UBE2D3-228ENST00000508974 TRPM7Q96QT4 1865 aa18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 IGHMBP2P38935 993 aaKnown RBP18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 SLFN5Q08AF3 891 aa18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 MICALL2Q8IY33 904 aa18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 PLA2G12BQ9BX93 195 aa18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 A0A1B0GUL6 1792 aa18.8■□□□□ 0.6
UBE2D3-228ENST00000508974 TMEM88BA6NKF7 163 aa18.79■□□□□ 0.6
UBE2D3-228ENST00000508974 TRAF5O00463 557 aa18.79■□□□□ 0.6
UBE2D3-228ENST00000508974 ATP2B4P23634 1241 aa18.79■□□□□ 0.6
UBE2D3-228ENST00000508974 MRPL50Q8N5N7 158 aaKnown RBP18.79■□□□□ 0.6
UBE2D3-228ENST00000508974 TRPM4Q8TD43 1214 aa18.79■□□□□ 0.6
UBE2D3-228ENST00000508974 FOXO4P98177 505 aa18.78■□□□□ 0.6
UBE2D3-228ENST00000508974 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
UBE2D3-228ENST00000508974 MPHOSPH8Q99549 860 aa18.78■□□□□ 0.6
UBE2D3-228ENST00000508974 SRCIN1Q9C0H9 1055 aa18.78■□□□□ 0.6
UBE2D3-228ENST00000508974 C9orf78Q9NZ63 289 aaPredicted RBP18.78■□□□□ 0.6
UBE2D3-228ENST00000508974 H7C1D1 291 aa18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 GRM8O00222 908 aa18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 CSF1RP07333 972 aa18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 CCT4P50991 539 aaKnown RBP18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 HIRAP54198 1017 aaPredicted RBP18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 SAMD7Q7Z3H4 446 aa18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 SSH1Q8WYL5 1049 aa18.77■□□□□ 0.6
UBE2D3-228ENST00000508974 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
UBE2D3-228ENST00000508974 TBC1D10BQ4KMP7 808 aaPredicted RBP18.76■□□□□ 0.59
UBE2D3-228ENST00000508974 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
UBE2D3-228ENST00000508974 RBM26Q5T8P6 1007 aaKnown RBP18.76■□□□□ 0.59
UBE2D3-228ENST00000508974 LMBR1LQ6UX01 489 aa18.76■□□□□ 0.59
UBE2D3-228ENST00000508974 ZNF646O15015 1829 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 ALDH1L1O75891 902 aa18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 EGFRP00533 1210 aa18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 FBXW7Q969H0 707 aa18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 GLIS2Q9BZE0 524 aaPredicted RBP18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 ABT1Q9ULW3 272 aaKnown RBP18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 MED23Q9ULK4 1368 aa18.75■□□□□ 0.59
UBE2D3-228ENST00000508974 POLR2AP24928 1970 aaKnown RBP18.74■□□□□ 0.59
UBE2D3-228ENST00000508974 CNTNAP1P78357 1384 aa18.74■□□□□ 0.59
UBE2D3-228ENST00000508974 KLRK1P26718 216 aa18.74■□□□□ 0.59
UBE2D3-228ENST00000508974 IFIT5Q13325 482 aaKnown RBP18.74■□□□□ 0.59
UBE2D3-228ENST00000508974 DPF2Q92785 391 aa18.74■□□□□ 0.59
UBE2D3-228ENST00000508974 ZNF594Q96JF6 807 aaPredicted RBP18.74■□□□□ 0.59
UBE2D3-228ENST00000508974 RPS12P25398 132 aaKnown RBP18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 KCNJ4P48050 445 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 CHRNDQ07001 517 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 TAF7LQ5H9L4 462 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 TXNRD3Q86VQ6 643 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 HELBQ8NG08 1087 aaPredicted RBP18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 SUCLG2Q96I99 432 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 ZNF408Q9H9D4 720 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 SMC4Q9NTJ3 1288 aa18.73■□□□□ 0.59
UBE2D3-228ENST00000508974 SNAP23O00161 211 aa18.72■□□□□ 0.59
UBE2D3-228ENST00000508974 TAF5LO75529 589 aa18.72■□□□□ 0.59
UBE2D3-228ENST00000508974 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
UBE2D3-228ENST00000508974 NBPF7P0C2Y1 421 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms