RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TRIM22Q8IYM9 498 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 FERD3LQ96RJ6 166 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 CHMP4BQ9H444 224 aaKnown RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 MRGBPQ9NV56 204 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 LRP2BPQ9P2M1 347 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 MAFBQ9Y5Q3 323 aaPredicted RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 MYL3P08590 195 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 CCDC175P0C221 793 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 MYLK4Q86YV6 388 aaPredicted RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 RASSF8Q8NHQ8 419 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 TOMM22Q9NS69 142 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 ATAD2Q6PL18 1390 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 ZNF131P52739 623 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 POU5F1Q01860 360 aaKnown RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 DPYDQ12882 1025 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 ANKRD45Q5TZF3 282 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 HOMER1Q86YM7 354 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 PLPP6Q8IY26 295 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 SECISBP2LQ93073 1101 aaKnown RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 ST20-MTHFSA0A0A6YYL1 179 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 PABPN1LA6NDY0 278 aaKnown RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 NFKB2Q00653 900 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 PDCD2Q16342 344 aaPredicted RBP4.63□□□□□ -1.67
NEDD4-209ENST00000508871 GGT6Q6P531 493 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 TBC1D31Q96DN5 1066 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 MPP4Q96JB8 637 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 CDC6Q99741 560 aa4.63□□□□□ -1.67
NEDD4-209ENST00000508871 ABCC11Q96J66 1382 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 GOLGA6L3A6NEY3 463 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 MINDY4BA8MYZ0 360 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 IRX3P78415 501 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 TAF3Q5VWG9 929 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 NUDT16L1Q9BRJ7 211 aaKnown RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 ADGRF5Q8IZF2 1346 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 CENPJQ9HC77 1338 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 C11orf95C9JLR9 678 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 F5H423 210 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 TDO2P48775 406 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 ARHGAP29Q52LW3 1261 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 ZNF654Q8IZM8 581 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 MICALL1Q8N3F8 863 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 NEUROD6Q96NK8 337 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 PFDN2Q9UHV9 154 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 DDX41Q9UJV9 622 aaKnown RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 MYCLP1P12525 358 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 MCCD1P59942 119 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 DHX8Q14562 1220 aaKnown RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 PNMA8AQ86V59 439 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 IQCA1Q86XH1 822 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 GRPEL1Q9HAV7 217 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 IKBKGQ9Y6K9 419 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 ANKRD36BQ8N2N9 1353 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 TMEM2Q9UHN6 1383 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 ATP5J2-PTCD1G3V325 749 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 GADD45BO75293 160 aaPredicted RBP4.62□□□□□ -1.67
NEDD4-209ENST00000508871 PRPHP41219 470 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 RAD51AP2Q09MP3 1159 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 STK3Q13188 491 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 C11orf96Q7Z7L8 435 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 OGFOD1Q8N543 542 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 CARD14Q9BXL6 1004 aa4.62□□□□□ -1.67
NEDD4-209ENST00000508871 MAGEB6P1A0A0J9YX57 407 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 HSD3B2P26439 372 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 FKBP4Q02790 459 aaKnown RBP eCLIP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 MTERF2Q49AM1 385 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 GTF3C2Q8WUA4 911 aaPredicted RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 TRIM5Q9C035 493 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 DDX56Q9NY93 547 aaKnown RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 EVC2Q86UK5 1308 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 PHRF1Q9P1Y6 1649 aaKnown RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 SMG6Q86US8 1419 aaKnown RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 ATP9BO43861 1147 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 DNM1Q05193 864 aaKnown RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 ZBTB33Q86T24 672 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 PARP2Q9UGN5 583 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 ZBED9Q6R2W3 1325 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 TTC36A6NLP5 189 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 PLIN5Q00G26 463 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 NGEFQ8N5V2 710 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 RUBCNQ92622 972 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 FSD1Q9BTV5 496 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 DEF6Q9H4E7 631 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 LIMD1Q9UGP4 676 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 LZTS3O60299 673 aaPredicted RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 MAP3K11Q16584 847 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 NBPF1Q3BBV0 1214 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 PLA2G4EQ3MJ16 856 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 DNTTIP2Q5QJE6 756 aaKnown RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 ZNF513Q8N8E2 541 aaPredicted RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 SGIP1Q9BQI5 828 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 HDAC5Q9UQL6 1122 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 TBX4P57082 545 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 RGL3Q3MIN7 710 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 CHAC2Q8WUX2 184 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 GNL3LQ9NVN8 582 aaKnown RBP4.61□□□□□ -1.67
NEDD4-209ENST00000508871 ANKARQ7Z5J8 1434 aa4.61□□□□□ -1.67
NEDD4-209ENST00000508871 FAM170AA1A519 330 aa4.6□□□□□ -1.67
NEDD4-209ENST00000508871 SCNN1AP37088 669 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms