RNA–Protein interactions for RNA: ENST00000508541.1

SLIT2-205, Transcript of slit guidance ligand 2, humanhuman

TSL 2

Gene SLIT2, Length 2,947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-205ENST00000508541 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 QRICH2Q9H0J4 1663 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 PAX7P23759 505 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 GPTP24298 496 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 ADCK5Q3MIX3 580 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 STAG1Q8WVM7 1258 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 CALR3Q96L12 384 aaKnown RBP10.6□□□□□ -0.71
SLIT2-205ENST00000508541 PNKPQ96T60 521 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
SLIT2-205ENST00000508541 CDK12Q9NYV4 1490 aaPredicted RBP10.6□□□□□ -0.71
SLIT2-205ENST00000508541 HMMRO75330 724 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 ELF1P32519 619 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 GBP6Q6ZN66 633 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 DDX54Q8TDD1 881 aaKnown RBP10.59□□□□□ -0.71
SLIT2-205ENST00000508541 ZSWIM4Q9H7M6 989 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
SLIT2-205ENST00000508541 SH2B1Q9NRF2 756 aaPredicted RBP10.59□□□□□ -0.71
SLIT2-205ENST00000508541 STAP2Q9UGK3 403 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 NRXN1Q9ULB1 1477 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 TET3O43151 1660 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 KIF3CO14782 793 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 USP5P45974 858 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 FAM71BQ8TC56 605 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 DHX58Q96C10 678 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 ABCB6Q9NP58 842 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 MCM8Q9UJA3 840 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 HECW2Q9P2P5 1572 aa10.59□□□□□ -0.71
SLIT2-205ENST00000508541 KLHL33A6NCF5 533 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 CCP110O43303 1012 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 COL9A3Q14050 684 aaPredicted RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 LARP1Q6PKG0 1096 aaKnown RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 GIMAP7Q8NHV1 300 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 KIFC2Q96AC6 838 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 ZSCAN31Q96LW9 406 aaPredicted RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 UTP14AQ9BVJ6 771 aaKnown RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 LRRCC1Q9C099 1032 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 RBM28Q9NW13 759 aaKnown RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 ANO10Q9NW15 660 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 EIF3JO75822 258 aaKnown RBP10.58□□□□□ -0.72
SLIT2-205ENST00000508541 USP8P40818 1118 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 GOLPH3LQ9H4A5 285 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 TPCN1Q9ULQ1 816 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 FAM169AQ9Y6X4 670 aa10.58□□□□□ -0.72
SLIT2-205ENST00000508541 NEBLO76041 1014 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 ECM2O94769 699 aaPredicted RBP10.57□□□□□ -0.72
SLIT2-205ENST00000508541 GNG11P61952 73 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 FBLN2P98095 1184 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 GOLGA8FQ08AF8 430 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 GOLGA8DPQ0D2H9 430 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 CEP57L1Q8IYX8 460 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 FAM107BQ9H098 131 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 RAB21Q9UL25 225 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 PRPF38AQ8NAV1 312 aaKnown RBP10.57□□□□□ -0.72
SLIT2-205ENST00000508541 JAKMIP1Q96N16 626 aaKnown RBP10.57□□□□□ -0.72
SLIT2-205ENST00000508541 SPG7Q9UQ90 795 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 ADGRL3Q9HAR2 1447 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 CASP8Q14790 479 aa10.57□□□□□ -0.72
SLIT2-205ENST00000508541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.57□□□□□ -0.72
SLIT2-205ENST00000508541 KIF1BO60333 1816 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 CTAGE5O15320 804 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 NRDCO43847 1150 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 CCT5P48643 541 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 NEDD9Q14511 834 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 CTCFLQ8NI51 663 aaPredicted RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 N4BP2L2Q92802 583 aaPredicted RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 TACO1Q9BSH4 297 aaKnown RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 CD248Q9HCU0 757 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 PPP6R1Q9UPN7 881 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 PPP2R2CQ9Y2T4 447 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 VWDEQ8N2E2 1590 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 LRRIQ3A6PVS8 624 aaPredicted RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 DHX8Q14562 1220 aaKnown RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 ZKSCAN4Q969J2 545 aaPredicted RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
SLIT2-205ENST00000508541 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
SLIT2-205ENST00000508541 PNPLA6Q8IY17 1366 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 RNF40O75150 1001 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 PDCP20941 246 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 DDR1Q08345 913 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 TBC1D8BQ0IIM8 1120 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 HSP90B2PQ58FF3 399 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
SLIT2-205ENST00000508541 IFT172Q9UG01 1749 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 H0YHG0 523 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 PRPF6O94906 941 aaKnown RBP10.55□□□□□ -0.72
SLIT2-205ENST00000508541 HMOX1P09601 288 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 SARNPP82979 210 aaKnown RBP10.55□□□□□ -0.72
SLIT2-205ENST00000508541 TMEM139Q8IV31 216 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 MSANTD4Q8NCY6 345 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 VEZTQ9HBM0 779 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 CYP46A1Q9Y6A2 500 aa10.55□□□□□ -0.72
SLIT2-205ENST00000508541 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
SLIT2-205ENST00000508541 MYO1FO00160 1098 aa10.54□□□□□ -0.72
SLIT2-205ENST00000508541 GIGYF1O75420 1035 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms