RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 H2AFB2P0C5Z0 115 aa8□□□□□ -1.13
PDLIM5-211ENST00000508531 ZAP70P43403 619 aa8□□□□□ -1.13
PDLIM5-211ENST00000508531 IREB2P48200 963 aaKnown RBP8□□□□□ -1.13
PDLIM5-211ENST00000508531 WFDC12Q8WWY7 111 aa8□□□□□ -1.13
PDLIM5-211ENST00000508531 SSBP4Q9BWG4 385 aaPredicted RBP8□□□□□ -1.13
PDLIM5-211ENST00000508531 RBSNQ9H1K0 784 aa8□□□□□ -1.13
PDLIM5-211ENST00000508531 SCO2A0A1W2PP80 73 aa7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 HOXD8P13378 290 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 NOS3P29474 1203 aa7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 IGF2-ASQ6U949 168 aa7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 IL22RA1Q8N6P7 574 aa7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 GPR152Q8TDT2 470 aa7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
PDLIM5-211ENST00000508531 ARID3CA6NKF2 412 aa7.98□□□□□ -1.13
PDLIM5-211ENST00000508531 ZBTB39O15060 712 aa7.98□□□□□ -1.13
PDLIM5-211ENST00000508531 STIM2Q9P246 746 aa7.98□□□□□ -1.13
PDLIM5-211ENST00000508531 SERPINA10Q9UK55 444 aa7.98□□□□□ -1.13
PDLIM5-211ENST00000508531 TRIM33Q9UPN9 1127 aa7.98□□□□□ -1.13
PDLIM5-211ENST00000508531 DLL1O00548 723 aa7.97□□□□□ -1.13
PDLIM5-211ENST00000508531 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
PDLIM5-211ENST00000508531 COL13A1Q5TAT6 717 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-211ENST00000508531 OR13H1Q8NG92 308 aa7.97□□□□□ -1.13
PDLIM5-211ENST00000508531 SEPT3Q9UH03 358 aa7.97□□□□□ -1.13
PDLIM5-211ENST00000508531 ABTB2Q8N961 1025 aa7.96□□□□□ -1.14
PDLIM5-211ENST00000508531 MEGF10Q96KG7 1140 aa7.96□□□□□ -1.14
PDLIM5-211ENST00000508531 FNDC3AQ9Y2H6 1198 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-211ENST00000508531 ATP11AP98196 1134 aa7.95□□□□□ -1.14
PDLIM5-211ENST00000508531 TTC39BQ5VTQ0 682 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-211ENST00000508531 ALX3O95076 343 aa7.94□□□□□ -1.14
PDLIM5-211ENST00000508531 HYAL2Q12891 473 aa7.94□□□□□ -1.14
PDLIM5-211ENST00000508531 SETDB1Q15047 1291 aa7.94□□□□□ -1.14
PDLIM5-211ENST00000508531 CYP2E1P05181 493 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 SCNN1AP37088 669 aa7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 CEP135Q66GS9 1140 aa7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 ATCAYQ86WG3 371 aa7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 NUDT16Q96DE0 195 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 SPACA7Q96KW9 195 aa7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 LACRTQ9GZZ8 138 aa7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 MRPL18Q9H0U6 180 aaKnown RBP7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 AKTIPQ9H8T0 292 aa7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 ABI2Q9NYB9 513 aaPredicted RBP7.93□□□□□ -1.14
PDLIM5-211ENST00000508531 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
PDLIM5-211ENST00000508531 SRA1Q9HD15 236 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-211ENST00000508531 PPME1Q9Y570 386 aa7.92□□□□□ -1.14
PDLIM5-211ENST00000508531 F8W735 103 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 LINC01387J3KSC0 135 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 ARTNQ5T4W7 220 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 TXNDC11Q6PKC3 985 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 MAP4K3Q8IVH8 894 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 CACTIN-AS1Q8N1I8 211 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 ZFP64Q9NPA5 681 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 TMEM63CQ9P1W3 806 aa7.91□□□□□ -1.14
PDLIM5-211ENST00000508531 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 KIF4AO95239 1232 aa7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 CDC25BP30305 580 aa7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 AGGF1Q8N302 714 aaeCLIP7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 MUC3BQ9H195 1237 aa7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
PDLIM5-211ENST00000508531 PRR23CQ6ZRP0 262 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 ZNF438Q7Z4V0 828 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 NCAPG2Q86XI2 1143 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 DZIP1LQ8IYY4 767 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 TMEM130Q8N3G9 435 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 GALNT11Q8NCW6 608 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 HELQQ8TDG4 1101 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 EDEM1Q92611 657 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 KANSL3Q9P2N6 904 aa7.89□□□□□ -1.15
PDLIM5-211ENST00000508531 CDC27P30260 824 aa7.88□□□□□ -1.15
PDLIM5-211ENST00000508531 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-211ENST00000508531 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-211ENST00000508531 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
PDLIM5-211ENST00000508531 CNTN3Q9P232 1028 aa7.88□□□□□ -1.15
PDLIM5-211ENST00000508531 GTF3C3Q9Y5Q9 886 aa7.88□□□□□ -1.15
PDLIM5-211ENST00000508531 A6NHS1 94 aa7.87□□□□□ -1.15
PDLIM5-211ENST00000508531 GLB1P16278 677 aa7.87□□□□□ -1.15
PDLIM5-211ENST00000508531 CEP120Q8N960 986 aa7.87□□□□□ -1.15
PDLIM5-211ENST00000508531 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
PDLIM5-211ENST00000508531 PBX4Q9BYU1 374 aa7.87□□□□□ -1.15
PDLIM5-211ENST00000508531 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-211ENST00000508531 WISP1O95388 367 aa7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 MPSTP25325 297 aa7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 CD68P34810 354 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 LRP8Q14114 963 aa7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 NOM1Q5C9Z4 860 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 GGNBP2Q9H3C7 697 aa7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 SH2B1Q9NRF2 756 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 KCNK4Q9NYG8 393 aa7.86□□□□□ -1.15
PDLIM5-211ENST00000508531 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 PDGFAP04085 211 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 ACPPP15309 386 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 EPHA1P21709 976 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 C8orf34Q49A92 452 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 Q6ZS46 218 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 NBPF11Q86T75 865 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 C1orf127Q8N9H9 656 aa7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 GTF3C2Q8WUA4 911 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-211ENST00000508531 POP1Q99575 1024 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms