RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SERPINB4P48594 390 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 TRAPPC3LQ5T215 181 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 COL13A1Q5TAT6 717 aaPredicted RBP10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 ALKBH2Q6NS38 261 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 GGNBP2Q9H3C7 697 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 ELP3Q9H9T3 547 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 EGFL7Q9UHF1 273 aa10.37□□□□□ -0.75
TOPBP1-206ENST00000508524 RPLP1P05386 114 aaKnown RBP10.36□□□□□ -0.75
TOPBP1-206ENST00000508524 PLD4Q96BZ4 506 aa10.36□□□□□ -0.75
TOPBP1-206ENST00000508524 POLIQ9UNA4 740 aa10.36□□□□□ -0.75
TOPBP1-206ENST00000508524 A0A0A0MRY4 1105 aa10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 A6NHS1 94 aa10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 FZD6O60353 706 aa10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 CYP2E1P05181 493 aaPredicted RBP10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 TRIM28Q13263 835 aaKnown RBP10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 TTC39BQ5VTQ0 682 aaPredicted RBP10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 XKR5Q6UX68 686 aa10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 ZNF438Q7Z4V0 828 aa10.35□□□□□ -0.75
TOPBP1-206ENST00000508524 ICMTO60725 284 aa10.34□□□□□ -0.75
TOPBP1-206ENST00000508524 GHRHP01286 108 aa10.34□□□□□ -0.75
TOPBP1-206ENST00000508524 PCSK2P16519 638 aa10.34□□□□□ -0.75
TOPBP1-206ENST00000508524 MSL1Q68DK7 614 aa10.34□□□□□ -0.75
TOPBP1-206ENST00000508524 TXNDC2Q86VQ3 553 aa10.34□□□□□ -0.75
TOPBP1-206ENST00000508524 DMRTC2Q8IXT2 367 aaPredicted RBP10.34□□□□□ -0.75
TOPBP1-206ENST00000508524 KIF4AO95239 1232 aa10.33□□□□□ -0.76
TOPBP1-206ENST00000508524 PDE4CQ08493 712 aa10.33□□□□□ -0.76
TOPBP1-206ENST00000508524 HYAL2Q12891 473 aa10.33□□□□□ -0.76
TOPBP1-206ENST00000508524 ECM1Q16610 540 aa10.33□□□□□ -0.76
TOPBP1-206ENST00000508524 C8orf34Q49A92 452 aa10.33□□□□□ -0.76
TOPBP1-206ENST00000508524 CNTN3Q9P232 1028 aa10.33□□□□□ -0.76
TOPBP1-206ENST00000508524 H3BRB1 525 aa10.32□□□□□ -0.76
TOPBP1-206ENST00000508524 GRIK4Q16099 956 aa10.32□□□□□ -0.76
TOPBP1-206ENST00000508524 TUT1Q9H6E5 874 aaKnown RBP10.32□□□□□ -0.76
TOPBP1-206ENST00000508524 CCDC87Q9NVE4 849 aa10.32□□□□□ -0.76
TOPBP1-206ENST00000508524 BAG6P46379 1132 aa10.31□□□□□ -0.76
TOPBP1-206ENST00000508524 AAMPQ13685 434 aa10.31□□□□□ -0.76
TOPBP1-206ENST00000508524 FMR1NBQ8N0W7 255 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-206ENST00000508524 RBSNQ9H1K0 784 aa10.31□□□□□ -0.76
TOPBP1-206ENST00000508524 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.31□□□□□ -0.76
TOPBP1-206ENST00000508524 ELNP15502 786 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 RAC1P63000 192 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 ATP11AP98196 1134 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 WFDC8Q8IUA0 241 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 C1orf127Q8N9H9 656 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 CHRDQ9H2X0 955 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 KANSL3Q9P2N6 904 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 TRIM33Q9UPN9 1127 aa10.3□□□□□ -0.76
TOPBP1-206ENST00000508524 GJD3Q8N144 294 aa10.29□□□□□ -0.76
TOPBP1-206ENST00000508524 DTWD1Q8N5C7 304 aa10.29□□□□□ -0.76
TOPBP1-206ENST00000508524 APBA3O96018 575 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 SELPP16109 830 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 USP5P45974 858 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 ARHGAP4P98171 946 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 GDF6Q6KF10 455 aaPredicted RBP10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 GLYCTKQ8IVS8 523 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 CEP120Q8N960 986 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 TTC16Q8NEE8 873 aa10.28□□□□□ -0.76
TOPBP1-206ENST00000508524 SPACA7Q96KW9 195 aa10.27□□□□□ -0.77
TOPBP1-206ENST00000508524 NACC1Q96RE7 527 aa10.27□□□□□ -0.77
TOPBP1-206ENST00000508524 RASSF4Q9H2L5 321 aa10.27□□□□□ -0.77
TOPBP1-206ENST00000508524 SALL4Q9UJQ4 1053 aa10.27□□□□□ -0.77
TOPBP1-206ENST00000508524 DEAF1O75398 565 aaPredicted RBP10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 TNFRSF21O75509 655 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 CES1P23141 567 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 EHHADHQ08426 723 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 SHISA2Q6UWI4 295 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 ADAMTSL4Q6UY14 1074 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 FBXO11Q86XK2 927 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 IL22RA1Q8N6P7 574 aa10.26□□□□□ -0.77
TOPBP1-206ENST00000508524 SNX29Q8TEQ0 813 aa10.25□□□□□ -0.77
TOPBP1-206ENST00000508524 FOXD3Q9UJU5 478 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-206ENST00000508524 ACPPP15309 386 aa10.24□□□□□ -0.77
TOPBP1-206ENST00000508524 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
TOPBP1-206ENST00000508524 CCER1Q8TC90 406 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-206ENST00000508524 LENG1Q96BZ8 264 aaPredicted RBP10.24□□□□□ -0.77
TOPBP1-206ENST00000508524 PBX4Q9BYU1 374 aa10.24□□□□□ -0.77
TOPBP1-206ENST00000508524 C9orf172C9J069 976 aa10.23□□□□□ -0.77
TOPBP1-206ENST00000508524 EREGO14944 169 aa10.23□□□□□ -0.77
TOPBP1-206ENST00000508524 SMNDC1O75940 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
TOPBP1-206ENST00000508524 BRD1O95696 1058 aa10.23□□□□□ -0.77
TOPBP1-206ENST00000508524 GATA4P43694 442 aa10.23□□□□□ -0.77
TOPBP1-206ENST00000508524 PHACTR2O75167 634 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 ADGRE1Q14246 886 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 MBTPS1Q14703 1052 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 CACTIN-AS1Q8N1I8 211 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 PMEPA1Q969W9 287 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 LACRTQ9GZZ8 138 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 BRPF3Q9ULD4 1205 aa10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 GNEQ9Y223 722 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-206ENST00000508524 NFKBIEO00221 500 aa10.21□□□□□ -0.77
TOPBP1-206ENST00000508524 DLL1O00548 723 aa10.21□□□□□ -0.77
TOPBP1-206ENST00000508524 SETDB1Q15047 1291 aa10.21□□□□□ -0.77
TOPBP1-206ENST00000508524 POP1Q99575 1024 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-206ENST00000508524 DZANK1Q9NVP4 752 aa10.21□□□□□ -0.77
TOPBP1-206ENST00000508524 PPME1Q9Y570 386 aa10.2□□□□□ -0.78
TOPBP1-206ENST00000508524 SOWAHDA6NJG2 315 aa10.19□□□□□ -0.78
TOPBP1-206ENST00000508524 NDUFB5O43674 189 aa10.19□□□□□ -0.78
TOPBP1-206ENST00000508524 TRPA1O75762 1119 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms