RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 SAMD7Q7Z3H4 446 aa23.1■■□□□ 1.29
SKP2-204ENST00000508514 DPF2Q92785 391 aa23.1■■□□□ 1.29
SKP2-204ENST00000508514 CAPNS2Q96L46 248 aa23.1■■□□□ 1.29
SKP2-204ENST00000508514 WTIPA6NIX2 430 aaPredicted RBP23.09■■□□□ 1.29
SKP2-204ENST00000508514 CELF2O95319 508 aaKnown RBP23.09■■□□□ 1.29
SKP2-204ENST00000508514 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
SKP2-204ENST00000508514 LBX1P52954 281 aa23.09■■□□□ 1.29
SKP2-204ENST00000508514 SAPCD2Q86UD0 394 aa23.09■■□□□ 1.29
SKP2-204ENST00000508514 TRPM7Q96QT4 1865 aa23.09■■□□□ 1.29
SKP2-204ENST00000508514 H7C1D1 291 aa23.08■■□□□ 1.29
SKP2-204ENST00000508514 CCDC152Q4G0S7 254 aa23.08■■□□□ 1.29
SKP2-204ENST00000508514 HSPA8P11142 646 aaKnown RBP23.07■■□□□ 1.28
SKP2-204ENST00000508514 CWF19L2Q2TBE0 894 aaKnown RBP23.07■■□□□ 1.28
SKP2-204ENST00000508514 TWISTNBQ3B726 338 aaPredicted RBP23.07■■□□□ 1.28
SKP2-204ENST00000508514 AIDAQ96BJ3 306 aa23.07■■□□□ 1.28
SKP2-204ENST00000508514 EYA3Q99504 573 aa23.07■■□□□ 1.28
SKP2-204ENST00000508514 UFL1O94874 794 aa23.06■■□□□ 1.28
SKP2-204ENST00000508514 VIL1P09327 827 aaKnown RBP23.06■■□□□ 1.28
SKP2-204ENST00000508514 HSP90B1P14625 803 aaKnown RBP23.06■■□□□ 1.28
SKP2-204ENST00000508514 TBC1D10BQ4KMP7 808 aaPredicted RBP23.06■■□□□ 1.28
SKP2-204ENST00000508514 CDC37L1Q7L3B6 337 aa23.06■■□□□ 1.28
SKP2-204ENST00000508514 USP48Q86UV5 1035 aa23.06■■□□□ 1.28
SKP2-204ENST00000508514 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
SKP2-204ENST00000508514 ZC3H12CQ9C0D7 883 aaKnown RBP23.06■■□□□ 1.28
SKP2-204ENST00000508514 SCN9AQ15858 1988 aa23.06■■□□□ 1.28
SKP2-204ENST00000508514 THSD7BQ9C0I4 1608 aa23.05■■□□□ 1.28
SKP2-204ENST00000508514 AOC2O75106 756 aa23.05■■□□□ 1.28
SKP2-204ENST00000508514 MAP2K1Q02750 393 aaPredicted RBP23.05■■□□□ 1.28
SKP2-204ENST00000508514 CHMP4AQ9BY43 222 aa23.05■■□□□ 1.28
SKP2-204ENST00000508514 ANKIB1Q9P2G1 1089 aa23.05■■□□□ 1.28
SKP2-204ENST00000508514 GGA1Q9UJY5 639 aa23.05■■□□□ 1.28
SKP2-204ENST00000508514 IL16Q14005 1332 aa23.05■■□□□ 1.28
SKP2-204ENST00000508514 NEURL1BA8MQ27 555 aa23.04■■□□□ 1.28
SKP2-204ENST00000508514 SLC4A2P04920 1241 aa23.04■■□□□ 1.28
SKP2-204ENST00000508514 CTSWP56202 376 aa23.04■■□□□ 1.28
SKP2-204ENST00000508514 GRM1Q13255 1194 aa23.04■■□□□ 1.28
SKP2-204ENST00000508514 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
SKP2-204ENST00000508514 PAXIP1Q6ZW49 1069 aaPredicted RBP23.04■■□□□ 1.28
SKP2-204ENST00000508514 H7C1W4 665 aa23.03■■□□□ 1.28
SKP2-204ENST00000508514 RPS12P25398 132 aaKnown RBP23.03■■□□□ 1.28
SKP2-204ENST00000508514 ECE1P42892 770 aa23.03■■□□□ 1.28
SKP2-204ENST00000508514 RBM26Q5T8P6 1007 aaKnown RBP23.03■■□□□ 1.28
SKP2-204ENST00000508514 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
SKP2-204ENST00000508514 STK31Q9BXU1 1019 aa23.03■■□□□ 1.28
SKP2-204ENST00000508514 GREM2Q9H772 168 aa23.03■■□□□ 1.28
SKP2-204ENST00000508514 ZNF408Q9H9D4 720 aa23.03■■□□□ 1.28
SKP2-204ENST00000508514 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
SKP2-204ENST00000508514 ASTN2O75129 1339 aaPredicted RBP23.02■■□□□ 1.28
SKP2-204ENST00000508514 HHIPL1Q96JK4 782 aa23.01■■□□□ 1.27
SKP2-204ENST00000508514 FANCIQ9NVI1 1328 aa23.01■■□□□ 1.27
SKP2-204ENST00000508514 VAMP4O75379 141 aa23■■□□□ 1.27
SKP2-204ENST00000508514 CASP7P55210 303 aa23■■□□□ 1.27
SKP2-204ENST00000508514 GMLQ99445 158 aa23■■□□□ 1.27
SKP2-204ENST00000508514 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
SKP2-204ENST00000508514 MINPP1Q9UNW1 487 aa23■■□□□ 1.27
SKP2-204ENST00000508514 SALL2Q9Y467 1007 aaPredicted RBP23■■□□□ 1.27
SKP2-204ENST00000508514 XDHP47989 1333 aa23■■□□□ 1.27
SKP2-204ENST00000508514 ADM5C9JUS6 153 aa22.99■■□□□ 1.27
SKP2-204ENST00000508514 MAP2K2P36507 400 aa22.99■■□□□ 1.27
SKP2-204ENST00000508514 FLIIQ13045 1269 aa22.99■■□□□ 1.27
SKP2-204ENST00000508514 UBE3BQ7Z3V4 1068 aa22.99■■□□□ 1.27
SKP2-204ENST00000508514 KRT26Q7Z3Y9 468 aa22.99■■□□□ 1.27
SKP2-204ENST00000508514 ZIC5Q96T25 663 aa22.99■■□□□ 1.27
SKP2-204ENST00000508514 BSDC1Q9NW68 430 aaPredicted RBP22.99■■□□□ 1.27
SKP2-204ENST00000508514 ATP2B4P23634 1241 aa22.98■■□□□ 1.27
SKP2-204ENST00000508514 ZNF280AP59817 542 aaPredicted RBP22.98■■□□□ 1.27
SKP2-204ENST00000508514 NEXNQ0ZGT2 675 aa22.98■■□□□ 1.27
SKP2-204ENST00000508514 GCKRQ14397 625 aa22.98■■□□□ 1.27
SKP2-204ENST00000508514 KIF4BQ2VIQ3 1234 aa22.97■■□□□ 1.27
SKP2-204ENST00000508514 RSBN1LQ6PCB5 846 aaPredicted RBP22.97■■□□□ 1.27
SKP2-204ENST00000508514 CDC5LQ99459 802 aaKnown RBP22.97■■□□□ 1.27
SKP2-204ENST00000508514 ZNF609O15014 1411 aa22.97■■□□□ 1.27
SKP2-204ENST00000508514 POLR2AP24928 1970 aaKnown RBP22.96■■□□□ 1.27
SKP2-204ENST00000508514 WDR63Q8IWG1 891 aa22.96■■□□□ 1.27
SKP2-204ENST00000508514 PLA2G12BQ9BX93 195 aa22.96■■□□□ 1.27
SKP2-204ENST00000508514 TSKSQ9UJT2 592 aa22.96■■□□□ 1.27
SKP2-204ENST00000508514 ZNF316A6NFI3 1004 aaPredicted RBP22.95■■□□□ 1.26
SKP2-204ENST00000508514 G3V3G9 751 aa22.95■■□□□ 1.26
SKP2-204ENST00000508514 EXOSC9Q06265 439 aaKnown RBP22.95■■□□□ 1.26
SKP2-204ENST00000508514 DCAF8Q5TAQ9 597 aa22.95■■□□□ 1.26
SKP2-204ENST00000508514 TXNRD3Q86VQ6 643 aa22.95■■□□□ 1.26
SKP2-204ENST00000508514 AGBL3Q8NEM8 1001 aa22.95■■□□□ 1.26
SKP2-204ENST00000508514 ANP32CO43423 234 aa22.94■■□□□ 1.26
SKP2-204ENST00000508514 CSF1RP07333 972 aa22.94■■□□□ 1.26
SKP2-204ENST00000508514 PODNQ7Z5L7 613 aa22.94■■□□□ 1.26
SKP2-204ENST00000508514 DNAAF4Q8WXU2 420 aa22.94■■□□□ 1.26
SKP2-204ENST00000508514 DCPSQ96C86 337 aaKnown RBP22.94■■□□□ 1.26
SKP2-204ENST00000508514 MXD3Q9BW11 206 aa22.94■■□□□ 1.26
SKP2-204ENST00000508514 GGA3Q9NZ52 723 aa22.94■■□□□ 1.26
SKP2-204ENST00000508514 CCT4P50991 539 aaKnown RBP22.93■■□□□ 1.26
SKP2-204ENST00000508514 HUNKP57058 714 aa22.93■■□□□ 1.26
SKP2-204ENST00000508514 FKBP5Q13451 457 aaPredicted RBP22.93■■□□□ 1.26
SKP2-204ENST00000508514 FAM161AQ3B820 660 aa22.93■■□□□ 1.26
SKP2-204ENST00000508514 MED23Q9ULK4 1368 aa22.92■■□□□ 1.26
SKP2-204ENST00000508514 USP17L3A6NCW0 530 aa22.92■■□□□ 1.26
SKP2-204ENST00000508514 USP17L4A6NCW7 530 aa22.92■■□□□ 1.26
SKP2-204ENST00000508514 FAM155AB1AL88 458 aaPredicted RBP22.92■■□□□ 1.26
SKP2-204ENST00000508514 ITGA6P23229 1130 aa22.92■■□□□ 1.26
SKP2-204ENST00000508514 KLRK1P26718 216 aa22.92■■□□□ 1.26
SKP2-204ENST00000508514 SCARF1Q14162 830 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms