RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 TMC4Q7Z404 712 aa10.77□□□□□ -0.68
USP46-207ENST00000508499 SIRT2Q8IXJ6 389 aa10.77□□□□□ -0.68
USP46-207ENST00000508499 NOP58Q9Y2X3 529 aaKnown RBP10.77□□□□□ -0.68
USP46-207ENST00000508499 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.68
USP46-207ENST00000508499 ARAP2Q8WZ64 1704 aa10.77□□□□□ -0.69
USP46-207ENST00000508499 NPHP1O15259 732 aa10.76□□□□□ -0.69
USP46-207ENST00000508499 SRGAP3O43295 1099 aa10.76□□□□□ -0.69
USP46-207ENST00000508499 NPR1P16066 1061 aa10.76□□□□□ -0.69
USP46-207ENST00000508499 PNMA6EA0A0J9YXQ4 647 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 FAM177BA6PVY3 158 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 CIAO1O76071 339 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 ITGA6P23229 1130 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 ALDH1B1P30837 517 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 PTPN12Q05209 780 aaKnown RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 IFIT5Q13325 482 aaKnown RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 CCDC57Q2TAC2 916 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 JARID2Q92833 1246 aaPredicted RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 MASTLQ96GX5 879 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 CDC5LQ99459 802 aaKnown RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 GREM2Q9H772 168 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 COL4A1P02462 1669 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 SLX4Q8IY92 1834 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 H0YIN7 160 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 BBOX1O75936 387 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 IRX6P78412 446 aaPredicted RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 RBM17Q96I25 401 aaKnown RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
USP46-207ENST00000508499 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 C1orf115Q9H7X2 142 aa10.75□□□□□ -0.69
USP46-207ENST00000508499 FER1L6Q2WGJ9 1857 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 KCNA3P22001 575 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 GRAPQ13588 217 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 HSP90AB4PQ58FF6 505 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
USP46-207ENST00000508499 SMC5Q8IY18 1101 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 GRAPLQ8TC17 118 aaPredicted RBP10.74□□□□□ -0.69
USP46-207ENST00000508499 RPGRQ92834 1020 aaKnown RBP10.74□□□□□ -0.69
USP46-207ENST00000508499 CNKSR1Q969H4 720 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 GCC1Q96CN9 775 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 BSDC1Q9NW68 430 aaPredicted RBP10.74□□□□□ -0.69
USP46-207ENST00000508499 PPP4R2Q9NY27 417 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 SNED1Q8TER0 1413 aa10.74□□□□□ -0.69
USP46-207ENST00000508499 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
USP46-207ENST00000508499 RPS8P62241 208 aaKnown RBP10.73□□□□□ -0.69
USP46-207ENST00000508499 KDM2BQ8NHM5 1336 aa10.73□□□□□ -0.69
USP46-207ENST00000508499 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
USP46-207ENST00000508499 IL15P40933 162 aaPredicted RBP10.72□□□□□ -0.69
USP46-207ENST00000508499 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
USP46-207ENST00000508499 C2CD5Q86YS7 1000 aa10.72□□□□□ -0.69
USP46-207ENST00000508499 ERC1Q8IUD2 1116 aa10.72□□□□□ -0.69
USP46-207ENST00000508499 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
USP46-207ENST00000508499 RIPOR2Q9Y4F9 1068 aa10.72□□□□□ -0.69
USP46-207ENST00000508499 MROH5Q6ZUA9 1318 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 EYA2O00167 538 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 IGHMBP2P38935 993 aaKnown RBP10.71□□□□□ -0.69
USP46-207ENST00000508499 ATG9AQ7Z3C6 839 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 SP8Q8IXZ3 490 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 C7orf43Q8WVR3 580 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 CELF1Q92879 486 aaKnown RBP10.71□□□□□ -0.69
USP46-207ENST00000508499 GPR108Q9NPR9 543 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
USP46-207ENST00000508499 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 LDHAL6AQ6ZMR3 332 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 CENPQQ7L2Z9 268 aaPredicted RBP10.7□□□□□ -0.7
USP46-207ENST00000508499 TTLL6Q8N841 843 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 VGLL2Q8N8G2 317 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 MPHOSPH8Q99549 860 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 PIM2Q9P1W9 311 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 CHMP3Q9Y3E7 222 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 ATP6V0A2Q9Y487 856 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 DUOX1Q9NRD9 1551 aa10.7□□□□□ -0.7
USP46-207ENST00000508499 DICER1Q9UPY3 1922 aaKnown RBP10.7□□□□□ -0.7
USP46-207ENST00000508499 SURF6O75683 361 aaKnown RBP10.69□□□□□ -0.7
USP46-207ENST00000508499 IGHDP01880 384 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 DPEP1P16444 411 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 SOGA3Q5TF21 947 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 PRPF40BQ6NWY9 871 aaKnown RBP10.69□□□□□ -0.7
USP46-207ENST00000508499 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 KIF1BPQ96EK5 621 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
USP46-207ENST00000508499 ANKRD2Q9GZV1 360 aa10.69□□□□□ -0.7
USP46-207ENST00000508499 PPEF1O14829 653 aaPredicted RBP10.68□□□□□ -0.7
USP46-207ENST00000508499 SASH1O94885 1247 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 PDE8BO95263 885 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 CHRNA5P30532 468 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 G3BP1Q13283 466 aaKnown RBP eCLIP10.68□□□□□ -0.7
USP46-207ENST00000508499 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 C15orf52Q6ZUT6 534 aaKnown RBP10.68□□□□□ -0.7
USP46-207ENST00000508499 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 CCDC136Q96JN2 1154 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 MINPP1Q9UNW1 487 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms