RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 RTL9Q8NET4 1388 aa19.89■□□□□ 0.77
DDR1-264ENST00000508472 ZC3H15Q8WU90 426 aaKnown RBP19.89■□□□□ 0.77
DDR1-264ENST00000508472 DPF2Q92785 391 aa19.89■□□□□ 0.77
DDR1-264ENST00000508472 CCDC85AQ96PX6 553 aaPredicted RBP19.89■□□□□ 0.77
DDR1-264ENST00000508472 ECE2O60344 883 aa19.88■□□□□ 0.77
DDR1-264ENST00000508472 GCKRQ14397 625 aa19.88■□□□□ 0.77
DDR1-264ENST00000508472 IFFO2Q5TF58 517 aa19.88■□□□□ 0.77
DDR1-264ENST00000508472 UBE3BQ7Z3V4 1068 aa19.88■□□□□ 0.77
DDR1-264ENST00000508472 TTLL11Q8NHH1 800 aa19.88■□□□□ 0.77
DDR1-264ENST00000508472 DBNDD1Q9H9R9 158 aa19.88■□□□□ 0.77
DDR1-264ENST00000508472 CNOT7Q9UIV1 285 aaKnown RBP19.88■□□□□ 0.77
DDR1-264ENST00000508472 YDJCA8MPS7 323 aa19.87■□□□□ 0.77
DDR1-264ENST00000508472 H7C1W4 665 aa19.87■□□□□ 0.77
DDR1-264ENST00000508472 ATP2B4P23634 1241 aa19.87■□□□□ 0.77
DDR1-264ENST00000508472 ABT1Q9ULW3 272 aaKnown RBP19.87■□□□□ 0.77
DDR1-264ENST00000508472 TRPM7Q96QT4 1865 aa19.86■□□□□ 0.77
DDR1-264ENST00000508472 IGHMBP2P38935 993 aaKnown RBP19.86■□□□□ 0.77
DDR1-264ENST00000508472 DOK7Q18PE1 504 aa19.86■□□□□ 0.77
DDR1-264ENST00000508472 PLA2G12BQ9BX93 195 aa19.86■□□□□ 0.77
DDR1-264ENST00000508472 BSDC1Q9NW68 430 aaPredicted RBP19.86■□□□□ 0.77
DDR1-264ENST00000508472 PSMD14O00487 310 aa19.85■□□□□ 0.77
DDR1-264ENST00000508472 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
DDR1-264ENST00000508472 MICALL2Q8IY33 904 aa19.85■□□□□ 0.77
DDR1-264ENST00000508472 GREM2Q9H772 168 aa19.85■□□□□ 0.77
DDR1-264ENST00000508472 PCNTO95613 3336 aa19.85■□□□□ 0.77
DDR1-264ENST00000508472 RASSF10A6NK89 507 aa19.84■□□□□ 0.77
DDR1-264ENST00000508472 HSPA1AP0DMV8 641 aaKnown RBP19.84■□□□□ 0.77
DDR1-264ENST00000508472 HSPA1BP0DMV9 641 aaKnown RBP19.84■□□□□ 0.77
DDR1-264ENST00000508472 PGAP2Q9UHJ9 254 aa19.84■□□□□ 0.77
DDR1-264ENST00000508472 COL4A1P02462 1669 aa19.84■□□□□ 0.77
DDR1-264ENST00000508472 MPHOSPH8Q99549 860 aa19.83■□□□□ 0.77
DDR1-264ENST00000508472 SPEF2Q9C093 1822 aa19.83■□□□□ 0.76
DDR1-264ENST00000508472 ECE1P42892 770 aa19.82■□□□□ 0.76
DDR1-264ENST00000508472 CDC37L1Q7L3B6 337 aa19.82■□□□□ 0.76
DDR1-264ENST00000508472 PODNQ7Z5L7 613 aa19.82■□□□□ 0.76
DDR1-264ENST00000508472 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
DDR1-264ENST00000508472 ANKRD2Q9GZV1 360 aa19.82■□□□□ 0.76
DDR1-264ENST00000508472 ZBTB12Q9Y330 459 aaPredicted RBP19.82■□□□□ 0.76
DDR1-264ENST00000508472 VIL1P09327 827 aaKnown RBP19.81■□□□□ 0.76
DDR1-264ENST00000508472 ITGA6P23229 1130 aa19.81■□□□□ 0.76
DDR1-264ENST00000508472 VEGFBP49765 207 aa19.81■□□□□ 0.76
DDR1-264ENST00000508472 GPR101Q96P66 508 aaPredicted RBP19.81■□□□□ 0.76
DDR1-264ENST00000508472 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
DDR1-264ENST00000508472 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
DDR1-264ENST00000508472 LEMD3Q9Y2U8 911 aa19.81■□□□□ 0.76
DDR1-264ENST00000508472 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
DDR1-264ENST00000508472 AGBL3Q8NEM8 1001 aa19.8■□□□□ 0.76
DDR1-264ENST00000508472 ANKRD18BA2A2Z9 1011 aa19.79■□□□□ 0.76
DDR1-264ENST00000508472 E9PSI1 815 aa19.79■□□□□ 0.76
DDR1-264ENST00000508472 CSF1RP07333 972 aa19.79■□□□□ 0.76
DDR1-264ENST00000508472 CCT4P50991 539 aaKnown RBP19.79■□□□□ 0.76
DDR1-264ENST00000508472 PAXIP1Q6ZW49 1069 aaPredicted RBP19.79■□□□□ 0.76
DDR1-264ENST00000508472 TRPM4Q8TD43 1214 aa19.79■□□□□ 0.76
DDR1-264ENST00000508472 DCPSQ96C86 337 aaKnown RBP19.79■□□□□ 0.76
DDR1-264ENST00000508472 PSME4Q14997 1843 aa19.79■□□□□ 0.76
DDR1-264ENST00000508472 ZNF521Q96K83 1311 aa19.78■□□□□ 0.76
DDR1-264ENST00000508472 TRAF5O00463 557 aa19.78■□□□□ 0.76
DDR1-264ENST00000508472 CELF2O95319 508 aaKnown RBP19.78■□□□□ 0.76
DDR1-264ENST00000508472 KCNJ4P48050 445 aa19.78■□□□□ 0.76
DDR1-264ENST00000508472 HIRAP54198 1017 aaPredicted RBP19.78■□□□□ 0.76
DDR1-264ENST00000508472 CASP7P55210 303 aa19.78■□□□□ 0.76
DDR1-264ENST00000508472 IFIT5Q13325 482 aaKnown RBP19.78■□□□□ 0.76
DDR1-264ENST00000508472 BEND3Q5T5X7 828 aa19.78■□□□□ 0.76
DDR1-264ENST00000508472 RSBN1LQ6PCB5 846 aaPredicted RBP19.78■□□□□ 0.76
DDR1-264ENST00000508472 GLIS2Q9BZE0 524 aaPredicted RBP19.78■□□□□ 0.76
DDR1-264ENST00000508472 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
DDR1-264ENST00000508472 WDR33Q9C0J8 1336 aaKnown RBP19.77■□□□□ 0.76
DDR1-264ENST00000508472 ZNF609O15014 1411 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 USP17L3A6NCW0 530 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 USP17L4A6NCW7 530 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 F6X3S4 739 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 ALDH1L1O75891 902 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 MAP2K1Q02750 393 aaPredicted RBP19.77■□□□□ 0.76
DDR1-264ENST00000508472 FAM161AQ3B820 660 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 TBC1D10BQ4KMP7 808 aaPredicted RBP19.77■□□□□ 0.76
DDR1-264ENST00000508472 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 SAMD7Q7Z3H4 446 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 KCNQ5Q9NR82 932 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 TLL2Q9Y6L7 1015 aa19.77■□□□□ 0.76
DDR1-264ENST00000508472 SCN9AQ15858 1988 aa19.77■□□□□ 0.75
DDR1-264ENST00000508472 GRM8O00222 908 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 MMP14P50281 582 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 RBM26Q5T8P6 1007 aaKnown RBP19.76■□□□□ 0.75
DDR1-264ENST00000508472 CST9Q5W186 159 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 SLC4A10Q6U841 1118 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 SRCIN1Q9C0H9 1055 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 COA1Q9GZY4 146 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 CHMP3Q9Y3E7 222 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 MYO3BQ8WXR4 1341 aa19.76■□□□□ 0.75
DDR1-264ENST00000508472 CCDC57Q2TAC2 916 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 KIF4BQ2VIQ3 1234 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 KRT26Q7Z3Y9 468 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 HHIPL1Q96JK4 782 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 BEGAINQ9BUH8 593 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 ZNF804BA4D1E1 1349 aa19.75■□□□□ 0.75
DDR1-264ENST00000508472 SHTN1A0MZ66 631 aa19.74■□□□□ 0.75
DDR1-264ENST00000508472 USP17L8P0C7I0 530 aa19.74■□□□□ 0.75
DDR1-264ENST00000508472 CTCFP49711 727 aaPredicted RBP19.74■□□□□ 0.75
DDR1-264ENST00000508472 COL13A1Q5TAT6 717 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms