RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 RIMBP2O15034 1052 aa17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 DCPSQ96C86 337 aaKnown RBP17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 RNF186Q9NXI6 227 aa17.41■□□□□ 0.38
POLR2J3-212ENST00000507355 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
POLR2J3-212ENST00000507355 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
POLR2J3-212ENST00000507355 DDX60Q8IY21 1712 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-212ENST00000507355 C6orf229H3BNL8 230 aa17.39■□□□□ 0.37
POLR2J3-212ENST00000507355 APAF1O14727 1248 aa17.39■□□□□ 0.37
POLR2J3-212ENST00000507355 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
POLR2J3-212ENST00000507355 DPF2Q92785 391 aa17.39■□□□□ 0.37
POLR2J3-212ENST00000507355 NSFL1CQ9UNZ2 370 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-212ENST00000507355 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
POLR2J3-212ENST00000507355 DOK7Q18PE1 504 aa17.38■□□□□ 0.37
POLR2J3-212ENST00000507355 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
POLR2J3-212ENST00000507355 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
POLR2J3-212ENST00000507355 KCNQ5Q9NR82 932 aa17.38■□□□□ 0.37
POLR2J3-212ENST00000507355 COL4A1P02462 1669 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 ECE2O60344 883 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 KIF4BQ2VIQ3 1234 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 TMC4Q7Z404 712 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 GGA3Q9NZ52 723 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
POLR2J3-212ENST00000507355 SLC10A3P09131 477 aa17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 RPS12P25398 132 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 GNAI1P63096 354 aa17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 GPSM2P81274 684 aa17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 CTU1Q7Z7A3 348 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 SULF1Q8IWU6 871 aa17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 POLLQ9UGP5 575 aa17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 ASTN2O75129 1339 aaPredicted RBP17.36■□□□□ 0.37
POLR2J3-212ENST00000507355 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
POLR2J3-212ENST00000507355 CDCA5Q96FF9 252 aa17.35■□□□□ 0.37
POLR2J3-212ENST00000507355 CSRNP1Q96S65 589 aa17.35■□□□□ 0.37
POLR2J3-212ENST00000507355 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
POLR2J3-212ENST00000507355 SCN9AQ15858 1988 aa17.35■□□□□ 0.37
POLR2J3-212ENST00000507355 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
POLR2J3-212ENST00000507355 EYA3Q99504 573 aa17.34■□□□□ 0.37
POLR2J3-212ENST00000507355 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-212ENST00000507355 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
POLR2J3-212ENST00000507355 C8orf58Q8NAV2 365 aa17.33■□□□□ 0.36
POLR2J3-212ENST00000507355 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-212ENST00000507355 RASAL3Q86YV0 1011 aa17.32■□□□□ 0.36
POLR2J3-212ENST00000507355 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-212ENST00000507355 MYD88Q99836 296 aa17.32■□□□□ 0.36
POLR2J3-212ENST00000507355 HPS5Q9UPZ3 1129 aa17.32■□□□□ 0.36
POLR2J3-212ENST00000507355 G3V3G9 751 aa17.31■□□□□ 0.36
POLR2J3-212ENST00000507355 DCAF8Q5TAQ9 597 aa17.31■□□□□ 0.36
POLR2J3-212ENST00000507355 ANGEL2Q5VTE6 544 aaKnown RBP17.31■□□□□ 0.36
POLR2J3-212ENST00000507355 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
POLR2J3-212ENST00000507355 JARID2Q92833 1246 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-212ENST00000507355 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-212ENST00000507355 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
POLR2J3-212ENST00000507355 SCAF8Q9UPN6 1271 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-212ENST00000507355 PAPPA2Q9BXP8 1791 aa17.3■□□□□ 0.36
POLR2J3-212ENST00000507355 UFL1O94874 794 aa17.29■□□□□ 0.36
POLR2J3-212ENST00000507355 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
POLR2J3-212ENST00000507355 SCARF1Q14162 830 aa17.29■□□□□ 0.36
POLR2J3-212ENST00000507355 MOB2Q70IA6 237 aa17.29■□□□□ 0.36
POLR2J3-212ENST00000507355 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
POLR2J3-212ENST00000507355 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
POLR2J3-212ENST00000507355 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 PCCAP05165 728 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 HSP90B1P14625 803 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 METTL22Q9BUU2 404 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
POLR2J3-212ENST00000507355 PDE8AO60658 829 aa17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 ZNF296Q8WUU4 475 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
POLR2J3-212ENST00000507355 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-212ENST00000507355 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
POLR2J3-212ENST00000507355 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-212ENST00000507355 CCDC85AQ96PX6 553 aaPredicted RBP17.26■□□□□ 0.35
POLR2J3-212ENST00000507355 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
POLR2J3-212ENST00000507355 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
POLR2J3-212ENST00000507355 FKBP1BP68106 108 aa17.25■□□□□ 0.35
POLR2J3-212ENST00000507355 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
POLR2J3-212ENST00000507355 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
POLR2J3-212ENST00000507355 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
POLR2J3-212ENST00000507355 PSME4Q14997 1843 aa17.25■□□□□ 0.35
POLR2J3-212ENST00000507355 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-212ENST00000507355 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-212ENST00000507355 PKN2Q16513 984 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-212ENST00000507355 PRAMEF18Q5VWM3 479 aa17.24■□□□□ 0.35
POLR2J3-212ENST00000507355 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
POLR2J3-212ENST00000507355 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms