RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ERVV-1B6SEH8 477 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 G3V3G9 751 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 ECE2O60344 883 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 KIF6Q6ZMV9 814 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
VCAN-207ENST00000507162 PPP1R42Q7Z4L9 355 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 IFNL1Q8IU54 200 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 GAS2L2Q8NHY3 880 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
VCAN-207ENST00000507162 RRP7AQ9Y3A4 280 aaKnown RBP9.72□□□□□ -0.85
VCAN-207ENST00000507162 UBR2Q8IWV8 1755 aa9.72□□□□□ -0.85
VCAN-207ENST00000507162 UNC80Q8N2C7 3258 aa9.71□□□□□ -0.85
VCAN-207ENST00000507162 NF2P35240 595 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 TTLL7Q6ZT98 887 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 DEFB123Q8N688 67 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 MAP3K15Q6ZN16 1313 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 UBN2Q6ZU65 1347 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 RIC1Q4ADV7 1423 aa9.71□□□□□ -0.86
VCAN-207ENST00000507162 NTSR2O95665 410 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 VIL1P09327 827 aaKnown RBP9.7□□□□□ -0.86
VCAN-207ENST00000507162 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
VCAN-207ENST00000507162 INHBEP58166 350 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 SP3Q02447 781 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
VCAN-207ENST00000507162 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 Q7L0L9 218 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 ARMC9Q7Z3E5 817 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 SLC10A4Q96EP9 437 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 UTP14AQ9BVJ6 771 aaKnown RBP9.7□□□□□ -0.86
VCAN-207ENST00000507162 NR2E3Q9Y5X4 410 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 PTCH2Q9Y6C5 1203 aa9.7□□□□□ -0.86
VCAN-207ENST00000507162 MANSC4A6NHS7 340 aaPredicted RBP9.69□□□□□ -0.86
VCAN-207ENST00000507162 DIAPH1O60610 1272 aaKnown RBP9.69□□□□□ -0.86
VCAN-207ENST00000507162 MYL6BP14649 208 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 SLC10A5Q5PT55 438 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 ZNF34Q8IZ26 560 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 RTL9Q8NET4 1388 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 PRO3102Q9H379 93 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 PRDM6Q9NQX0 595 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 POLLQ9UGP5 575 aa9.69□□□□□ -0.86
VCAN-207ENST00000507162 IGF2BP3O00425 579 aaKnown RBP eCLIP9.68□□□□□ -0.86
VCAN-207ENST00000507162 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
VCAN-207ENST00000507162 ZNF280AP59817 542 aaPredicted RBP9.68□□□□□ -0.86
VCAN-207ENST00000507162 CAP1Q01518 475 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 CRHR2Q13324 411 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 GRAPQ13588 217 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 ARHGEF6Q15052 776 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
VCAN-207ENST00000507162 GRAPLQ8TC17 118 aaPredicted RBP9.68□□□□□ -0.86
VCAN-207ENST00000507162 SH3TC2Q8TF17 1288 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 EYA3Q99504 573 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 HTATIP2Q9BUP3 242 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 MYOZ2Q9NPC6 264 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 STAP2Q9UGK3 403 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 ANGEL1Q9UNK9 670 aaKnown RBP9.68□□□□□ -0.86
VCAN-207ENST00000507162 STXBP5LQ9Y2K9 1186 aa9.68□□□□□ -0.86
VCAN-207ENST00000507162 ZBTB22O15209 634 aa9.67□□□□□ -0.86
VCAN-207ENST00000507162 USP17L8P0C7I0 530 aa9.67□□□□□ -0.86
VCAN-207ENST00000507162 GPSM2P81274 684 aa9.67□□□□□ -0.86
VCAN-207ENST00000507162 ZC3H12CQ9C0D7 883 aaKnown RBP9.67□□□□□ -0.86
VCAN-207ENST00000507162 FZD1Q9UP38 647 aa9.67□□□□□ -0.86
VCAN-207ENST00000507162 LAMA3Q16787 3333 aa9.67□□□□□ -0.86
VCAN-207ENST00000507162 ZBTB7BO15156 539 aaPredicted RBP9.66□□□□□ -0.86
VCAN-207ENST00000507162 NBPF9Q3BBW0 867 aa9.66□□□□□ -0.86
VCAN-207ENST00000507162 PARP10Q53GL7 1025 aa9.66□□□□□ -0.86
VCAN-207ENST00000507162 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
VCAN-207ENST00000507162 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
VCAN-207ENST00000507162 MCM10Q7L590 875 aa9.66□□□□□ -0.86
VCAN-207ENST00000507162 AGBL3Q8NEM8 1001 aa9.66□□□□□ -0.86
VCAN-207ENST00000507162 ZNF428Q96B54 188 aa9.66□□□□□ -0.86
VCAN-207ENST00000507162 MIS18AQ9NYP9 233 aa9.66□□□□□ -0.86
VCAN-207ENST00000507162 TTC28Q96AY4 2481 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 IBTKQ9P2D0 1353 aaPredicted RBP9.65□□□□□ -0.86
VCAN-207ENST00000507162 A0A1W2PPC1 479 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 COL9A1P20849 921 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 POLA2Q14181 598 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 LDLRAD1Q5T700 205 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 TMC4Q7Z404 712 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
VCAN-207ENST00000507162 KNSTRNQ9Y448 316 aa9.65□□□□□ -0.86
VCAN-207ENST00000507162 EVI5O60447 810 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
VCAN-207ENST00000507162 MTFR1Q15390 333 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 TBC1D16Q8TBP0 767 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 WNK4Q96J92 1243 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 CLMNQ96JQ2 1002 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 MTMR10Q9NXD2 777 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 TRMT112Q9UI30 125 aaKnown RBP9.64□□□□□ -0.87
VCAN-207ENST00000507162 RBBP6Q7Z6E9 1792 aaKnown RBP9.64□□□□□ -0.87
VCAN-207ENST00000507162 ZNF609O15014 1411 aa9.64□□□□□ -0.87
VCAN-207ENST00000507162 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
VCAN-207ENST00000507162 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
VCAN-207ENST00000507162 SHISA4Q96DD7 197 aa9.63□□□□□ -0.87
VCAN-207ENST00000507162 PHACTR3Q96KR7 559 aa9.63□□□□□ -0.87
VCAN-207ENST00000507162 VCANP13611 3396 aa9.62□□□□□ -0.87
VCAN-207ENST00000507162 NUP98P52948 1817 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms