RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 SRGAP3O43295 1099 aa11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 C21orf2O43822 256 aa11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 HOXA10P31260 410 aaPredicted RBP11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 RFX5P48382 616 aaPredicted RBP11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 LRRC24Q50LG9 513 aa11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 STYK1Q6J9G0 422 aa11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 TTLL6Q8N841 843 aa11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
SCAMP1-202ENST00000506858 ANKRD18BA2A2Z9 1011 aa11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 SNAP23O00161 211 aa11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 YBX3P16989 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 RPS8P62241 208 aaKnown RBP11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 ATP8B2P98198 1209 aa11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 IFIT5Q13325 482 aaKnown RBP11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 GRAPQ13588 217 aa11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 CCDC57Q2TAC2 916 aa11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 GRAPLQ8TC17 118 aaPredicted RBP11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 CRAMP1Q96RY5 1269 aa11.03□□□□□ -0.64
SCAMP1-202ENST00000506858 KIAA1551Q9HCM1 1747 aa11.02□□□□□ -0.64
SCAMP1-202ENST00000506858 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.64
SCAMP1-202ENST00000506858 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.64
SCAMP1-202ENST00000506858 TAF7LQ5H9L4 462 aa11.02□□□□□ -0.64
SCAMP1-202ENST00000506858 ANKRD18AQ8IVF6 992 aa11.02□□□□□ -0.64
SCAMP1-202ENST00000506858 GPR101Q96P66 508 aaPredicted RBP11.02□□□□□ -0.64
SCAMP1-202ENST00000506858 SLX4Q8IY92 1834 aa11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 KIF13BQ9NQT8 1826 aa11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 APBB1O00213 710 aa11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 GABBR2O75899 941 aa11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 C7orf43Q8WVR3 580 aa11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 CNKSR1Q969H4 720 aa11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
SCAMP1-202ENST00000506858 RIC1Q4ADV7 1423 aa11.01□□□□□ -0.65
SCAMP1-202ENST00000506858 TAF5LO75529 589 aa11.01□□□□□ -0.65
SCAMP1-202ENST00000506858 ALDH1B1P30837 517 aa11.01□□□□□ -0.65
SCAMP1-202ENST00000506858 LDHAL6AQ6ZMR3 332 aa11.01□□□□□ -0.65
SCAMP1-202ENST00000506858 CNNM1Q9NRU3 951 aa11.01□□□□□ -0.65
SCAMP1-202ENST00000506858 LRP5O75197 1615 aa11.01□□□□□ -0.65
SCAMP1-202ENST00000506858 BBOX1O75936 387 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 IGHMBP2P38935 993 aaKnown RBP11□□□□□ -0.65
SCAMP1-202ENST00000506858 GPSM2P81274 684 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 MTX1Q13505 466 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 GPR162Q16538 588 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
SCAMP1-202ENST00000506858 MPHOSPH8Q99549 860 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 CACNA1SQ13698 1873 aa11□□□□□ -0.65
SCAMP1-202ENST00000506858 RTL9Q8NET4 1388 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 SURF6O75683 361 aaKnown RBP10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 IGHDP01880 384 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 ARHGAP27Q6ZUM4 889 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 SSH3Q8TE77 659 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 HDAC5Q9UQL6 1122 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 ATP6V0A2Q9Y487 856 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 MYH3P11055 1940 aa10.99□□□□□ -0.65
SCAMP1-202ENST00000506858 EYA2O00167 538 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 NEFLP07196 543 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 RASSF7Q02833 373 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 CHRNDQ07001 517 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 RPAP2Q8IXW5 612 aaPredicted RBP10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 BSDC1Q9NW68 430 aaPredicted RBP10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 RIPOR2Q9Y4F9 1068 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 KLRK1P26718 216 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 PRELPP51888 382 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 SP8Q8IXZ3 490 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 COPRSQ9NQ92 184 aa10.98□□□□□ -0.65
SCAMP1-202ENST00000506858 NFKBIEO00221 500 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 RIMBP2O15034 1052 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 SMARCA5O60264 1052 aaPredicted RBP10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 SASH1O94885 1247 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 TFCP2Q12800 502 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 OS9Q13438 667 aaPredicted RBP10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 METTL24Q5JXM2 366 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 ZNF277Q9NRM2 450 aaPredicted RBP10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 ANKIB1Q9P2G1 1089 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 SPEF2Q9C093 1822 aa10.97□□□□□ -0.65
SCAMP1-202ENST00000506858 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
SCAMP1-202ENST00000506858 G3BP1Q13283 466 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCAMP1-202ENST00000506858 MPNDQ8N594 471 aa10.96□□□□□ -0.65
SCAMP1-202ENST00000506858 IL1RAPL2Q9NP60 686 aa10.96□□□□□ -0.65
SCAMP1-202ENST00000506858 BRCA1P38398 1863 aaKnown RBP10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 UFL1O94874 794 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 CCDC93Q567U6 631 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 B4GALNT3Q6L9W6 998 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 DPP8Q6V1X1 898 aaPredicted RBP10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 TXNRD3Q86VQ6 643 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 HMMRO75330 724 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 TIMM10P62072 90 aa10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms