RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TAF7LQ5H9L4 462 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 SIRT2Q8IXJ6 389 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 RTKN2Q8IZC4 609 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
TCOF1-210ENST00000506767 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 FBXO3Q9UK99 471 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 RIPOR2Q9Y4F9 1068 aa16.01■□□□□ 0.15
TCOF1-210ENST00000506767 A0A1B0GUL6 1792 aa16■□□□□ 0.15
TCOF1-210ENST00000506767 DUOX1Q9NRD9 1551 aa16■□□□□ 0.15
TCOF1-210ENST00000506767 CHD4Q14839 1912 aa16■□□□□ 0.15
TCOF1-210ENST00000506767 LTBP3Q9NS15 1303 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 EYA2O00167 538 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 NFKBIEO00221 500 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 CIAO1O76071 339 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 IRX6P78412 446 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-210ENST00000506767 GPSM2P81274 684 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 CHRNDQ07001 517 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 ATG9AQ7Z3C6 839 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 MPNDQ8N594 471 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 PSMD1Q99460 953 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 RTFDC1Q9BY42 306 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-210ENST00000506767 TMX4Q9H1E5 349 aaPredicted RBP15.99■□□□□ 0.15
TCOF1-210ENST00000506767 PA2G4Q9UQ80 394 aaKnown RBP15.99■□□□□ 0.15
TCOF1-210ENST00000506767 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
TCOF1-210ENST00000506767 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
TCOF1-210ENST00000506767 CNNM1Q9NRU3 951 aa15.98■□□□□ 0.15
TCOF1-210ENST00000506767 NSFL1CQ9UNZ2 370 aaKnown RBP15.98■□□□□ 0.15
TCOF1-210ENST00000506767 NOP58Q9Y2X3 529 aaKnown RBP15.98■□□□□ 0.15
TCOF1-210ENST00000506767 XDHP47989 1333 aa15.97■□□□□ 0.15
TCOF1-210ENST00000506767 DPP8Q6V1X1 898 aaPredicted RBP15.97■□□□□ 0.15
TCOF1-210ENST00000506767 ANKRD2Q9GZV1 360 aa15.97■□□□□ 0.15
TCOF1-210ENST00000506767 SBF1O95248 1867 aa15.97■□□□□ 0.15
TCOF1-210ENST00000506767 MROH5Q6ZUA9 1318 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 PRELPP51888 382 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 RASSF7Q02833 373 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 TBC1D16Q8TBP0 767 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 SIL1Q9H173 461 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 TAOK3Q9H2K8 898 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 POLLQ9UGP5 575 aa15.96■□□□□ 0.15
TCOF1-210ENST00000506767 GOLGB1Q14789 3259 aaKnown RBP15.95■□□□□ 0.14
TCOF1-210ENST00000506767 HMMRO75330 724 aa15.95■□□□□ 0.14
TCOF1-210ENST00000506767 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
TCOF1-210ENST00000506767 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
TCOF1-210ENST00000506767 SUPT20HQ8NEM7 779 aa15.95■□□□□ 0.14
TCOF1-210ENST00000506767 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
TCOF1-210ENST00000506767 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
TCOF1-210ENST00000506767 WTIPA6NIX2 430 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-210ENST00000506767 TAF5LO75529 589 aa15.94■□□□□ 0.14
TCOF1-210ENST00000506767 SURF6O75683 361 aaKnown RBP15.94■□□□□ 0.14
TCOF1-210ENST00000506767 PDE8BO95263 885 aa15.94■□□□□ 0.14
TCOF1-210ENST00000506767 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
TCOF1-210ENST00000506767 GGA1Q9UJY5 639 aa15.94■□□□□ 0.14
TCOF1-210ENST00000506767 CCDC88AQ3V6T2 1871 aa15.94■□□□□ 0.14
TCOF1-210ENST00000506767 UFL1O94874 794 aa15.93■□□□□ 0.14
TCOF1-210ENST00000506767 SASH1O94885 1247 aa15.93■□□□□ 0.14
TCOF1-210ENST00000506767 G3BP1Q13283 466 aaKnown RBP eCLIP15.93■□□□□ 0.14
TCOF1-210ENST00000506767 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
TCOF1-210ENST00000506767 ZNF804BA4D1E1 1349 aa15.93■□□□□ 0.14
TCOF1-210ENST00000506767 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
TCOF1-210ENST00000506767 DICER1Q9UPY3 1922 aaKnown RBP15.92■□□□□ 0.14
TCOF1-210ENST00000506767 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 SNAP23O00161 211 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 LMNB1P20700 586 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 FGFR2P21802 821 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 IARSP41252 1262 aaKnown RBP15.92■□□□□ 0.14
TCOF1-210ENST00000506767 KIAA2012Q0VF49 1180 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 UBE4AQ14139 1066 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 C15orf52Q6ZUT6 534 aaKnown RBP15.92■□□□□ 0.14
TCOF1-210ENST00000506767 EYA3Q99504 573 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
TCOF1-210ENST00000506767 CEP126Q9P2H0 1117 aa15.92■□□□□ 0.14
TCOF1-210ENST00000506767 HDAC1Q13547 482 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-210ENST00000506767 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
TCOF1-210ENST00000506767 DCTPP1Q9H773 170 aa15.91■□□□□ 0.14
TCOF1-210ENST00000506767 EXOC6BQ9Y2D4 811 aa15.91■□□□□ 0.14
TCOF1-210ENST00000506767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
TCOF1-210ENST00000506767 COL4A5P29400 1685 aa15.91■□□□□ 0.14
TCOF1-210ENST00000506767 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
TCOF1-210ENST00000506767 TFCP2Q12800 502 aa15.9■□□□□ 0.14
TCOF1-210ENST00000506767 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
TCOF1-210ENST00000506767 GPR101Q96P66 508 aaPredicted RBP15.9■□□□□ 0.14
TCOF1-210ENST00000506767 PPIP5K2O43314 1243 aa15.89■□□□□ 0.13
TCOF1-210ENST00000506767 PUM3Q15397 648 aaKnown RBP15.89■□□□□ 0.13
TCOF1-210ENST00000506767 AOC3Q16853 763 aa15.89■□□□□ 0.13
TCOF1-210ENST00000506767 TXNRD3Q86VQ6 643 aa15.89■□□□□ 0.13
TCOF1-210ENST00000506767 ERC1Q8IUD2 1116 aa15.89■□□□□ 0.13
TCOF1-210ENST00000506767 ZC3H12CQ9C0D7 883 aaKnown RBP15.89■□□□□ 0.13
TCOF1-210ENST00000506767 RIMBP2O15034 1052 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 RAB11FIP3O75154 756 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 KLRK1P26718 216 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 KCNJ4P48050 445 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 C1QTNF8P60827 252 aa15.88■□□□□ 0.13
TCOF1-210ENST00000506767 OS9Q13438 667 aaPredicted RBP15.88■□□□□ 0.13
TCOF1-210ENST00000506767 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1541 ms