RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 FAM198AQ9UFP1 575 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 COL15A1P39059 1388 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 RNMTO43148 476 aaKnown RBP7.46□□□□□ -1.22
SCLT1-207ENST00000506233 BEND3Q5T5X7 828 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 TTC13Q8NBP0 860 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 FAM161BQ96MY7 647 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 TBC1D32Q96NH3 1257 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 BABAM1Q9NWV8 329 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 CFAP99D6REC4 459 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 ANKRD24Q8TF21 1146 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 IPO9Q96P70 1041 aaKnown RBP7.45□□□□□ -1.22
SCLT1-207ENST00000506233 MYH15Q9Y2K3 1946 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 BCL9LQ86UU0 1499 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 GNAT3A8MTJ3 354 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
SCLT1-207ENST00000506233 MTMR3Q13615 1198 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 SF3A1Q15459 793 aaKnown RBP7.45□□□□□ -1.22
SCLT1-207ENST00000506233 NGDNQ8NEJ9 315 aaKnown RBP7.45□□□□□ -1.22
SCLT1-207ENST00000506233 TSC1Q92574 1164 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 BTAF1O14981 1849 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L15C9J2P7 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L10C9JJH3 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L13C9JLJ4 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L12C9JPN9 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L11C9JVI0 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L21D6R901 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L18D6R9N7 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L22D6RA61 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L17D6RBQ6 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L19D6RCP7 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L20D6RJB6 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 PHKG2P15735 406 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 NCLP19338 710 aaKnown RBP7.45□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 AAMPQ13685 434 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 NR6A1Q15406 480 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 ANKRD44Q8N8A2 993 aa7.45□□□□□ -1.22
SCLT1-207ENST00000506233 DDX11L8A8MPP1 907 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 PHF14O94880 888 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 IGKV5-2P06315 115 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 LARGE2Q8N3Y3 721 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 SUGT1Q9Y2Z0 365 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 KIF16BQ96L93 1317 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 TNRC6CQ9HCJ0 1690 aaKnown RBP7.44□□□□□ -1.22
SCLT1-207ENST00000506233 TINF2Q9BSI4 451 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 PPME1Q9Y570 386 aa7.44□□□□□ -1.22
SCLT1-207ENST00000506233 PTK7Q13308 1070 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 RBM42Q9BTD8 480 aaKnown RBP7.43□□□□□ -1.22
SCLT1-207ENST00000506233 ANP32EQ9BTT0 268 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 PTPRCP08575 1304 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
SCLT1-207ENST00000506233 AKAP4Q5JQC9 854 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 METTL16Q86W50 562 aaKnown RBP7.43□□□□□ -1.22
SCLT1-207ENST00000506233 SLAIN1Q8ND83 568 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 JCADQ9P266 1359 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 IQSEC3Q9UPP2 1182 aaPredicted RBP7.43□□□□□ -1.22
SCLT1-207ENST00000506233 KIAA1551Q9HCM1 1747 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 LOC102724159A0A0B4J2E5 919 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 RCCD1A6NED2 376 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 PWP2Q15269 919 aaKnown RBP7.43□□□□□ -1.22
SCLT1-207ENST00000506233 NUTM1Q86Y26 1132 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 UNC5CLQ8IV45 518 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 MYH7P12883 1935 aa7.43□□□□□ -1.22
SCLT1-207ENST00000506233 NPHP3Q7Z494 1330 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 NBPF26B4DH59 902 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 H3BRB1 525 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 ATP2B4P23634 1241 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 NBPF14Q5TI25 921 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 NBPF10Q6P3W6 841 aaKnown RBP7.42□□□□□ -1.22
SCLT1-207ENST00000506233 CAPN12Q6ZSI9 719 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 NBPF15Q8N660 670 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 OSBPL3Q9H4L5 887 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 TUT1Q9H6E5 874 aaKnown RBP7.42□□□□□ -1.22
SCLT1-207ENST00000506233 LGR5O75473 907 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 NBPF7P0C2Y1 421 aaPredicted RBP7.42□□□□□ -1.22
SCLT1-207ENST00000506233 TNNI2P48788 182 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 RFX5P48382 616 aaPredicted RBP7.42□□□□□ -1.22
SCLT1-207ENST00000506233 CCDC144BQ3MJ40 725 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
SCLT1-207ENST00000506233 MPRIPQ6WCQ1 1025 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 CHD1LQ86WJ1 897 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 TANGO6Q9C0B7 1094 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 SOS1Q07889 1333 aaPredicted RBP7.41□□□□□ -1.22
SCLT1-207ENST00000506233 KCNH2Q12809 1159 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 EPHA10Q5JZY3 1008 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 BOLA1Q9Y3E2 137 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 RIPOR2Q9Y4F9 1068 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 UBR3Q6ZT12 1888 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 USP42Q9H9J4 1324 aaKnown RBP7.41□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L5A8MUK1 530 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 ABL1P00519 1130 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 SLC4A3P48751 1232 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 TAF7Q15545 349 aaPredicted RBP7.41□□□□□ -1.22
SCLT1-207ENST00000506233 CC2D2BQ6DHV5 1058 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 KCNH5Q8NCM2 988 aa7.41□□□□□ -1.22
SCLT1-207ENST00000506233 CLP1Q92989 425 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms