RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ELP3Q9H9T3 547 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 DNAJB12Q9NXW2 375 aaKnown RBP7.19□□□□□ -1.26
CHD1-203ENST00000505657 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 BRPF3Q9ULD4 1205 aa7.19□□□□□ -1.26
CHD1-203ENST00000505657 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
CHD1-203ENST00000505657 ELOA3DA6NLF2 546 aaPredicted RBP7.18□□□□□ -1.26
CHD1-203ENST00000505657 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 IGHA2P01877 340 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 ELOA3BQ3SY89 546 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 COL13A1Q5TAT6 717 aaPredicted RBP7.18□□□□□ -1.26
CHD1-203ENST00000505657 ZNF438Q7Z4V0 828 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 ELOA3Q8NG57 546 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 EFCC1Q9HA90 598 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 TPSG1Q9NRR2 321 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 TLR7Q9NYK1 1049 aaKnown RBP7.18□□□□□ -1.26
CHD1-203ENST00000505657 CNTN3Q9P232 1028 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 FOXD3Q9UJU5 478 aaPredicted RBP7.18□□□□□ -1.26
CHD1-203ENST00000505657 SLC6A14Q9UN76 642 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 FNDC3AQ9Y2H6 1198 aaKnown RBP7.18□□□□□ -1.26
CHD1-203ENST00000505657 STARD13Q9Y3M8 1113 aa7.18□□□□□ -1.26
CHD1-203ENST00000505657 GPR182O15218 404 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 NDUFB5O43674 189 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 PCSK2P16519 638 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 LCE3BQ5TA77 95 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 PDE12Q6L8Q7 609 aaKnown RBP7.17□□□□□ -1.26
CHD1-203ENST00000505657 HFE2Q6ZVN8 426 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 NSUN5Q96P11 429 aaKnown RBP7.17□□□□□ -1.26
CHD1-203ENST00000505657 FAM129BQ96TA1 746 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 KRTAP4-12Q9BQ66 201 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 CHRDQ9H2X0 955 aa7.17□□□□□ -1.26
CHD1-203ENST00000505657 GPLD1P80108 840 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 XKR5Q6UX68 686 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 SND1Q7KZF4 910 aaKnown RBP eCLIP7.16□□□□□ -1.26
CHD1-203ENST00000505657 C1orf127Q8N9H9 656 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 OR13H1Q8NG92 308 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 TRPM4Q8TD43 1214 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 GZF1Q9H116 711 aaPredicted RBP7.16□□□□□ -1.26
CHD1-203ENST00000505657 ABI2Q9NYB9 513 aaPredicted RBP7.16□□□□□ -1.26
CHD1-203ENST00000505657 KANSL3Q9P2N6 904 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 DCTN4Q9UJW0 460 aa7.16□□□□□ -1.26
CHD1-203ENST00000505657 J3QW42 95 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 DYRK3O43781 588 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 TNFRSF21O75509 655 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 ALBP02768 609 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
CHD1-203ENST00000505657 PSAPP07602 524 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 MAPK1P28482 360 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 USP5P45974 858 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 PLAURQ03405 335 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 ARTNQ5T4W7 220 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 TMC7Q7Z402 723 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 RBCK1Q9BYM8 510 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 ZFP64Q9NPA5 681 aa7.15□□□□□ -1.26
CHD1-203ENST00000505657 HOXD8P13378 290 aaPredicted RBP7.14□□□□□ -1.27
CHD1-203ENST00000505657 CPB1P15086 417 aa7.14□□□□□ -1.27
CHD1-203ENST00000505657 NRLP54845 237 aa7.14□□□□□ -1.27
CHD1-203ENST00000505657 TTC39BQ5VTQ0 682 aaPredicted RBP7.14□□□□□ -1.27
CHD1-203ENST00000505657 EREGO14944 169 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 APBA3O96018 575 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 ACPPP15309 386 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 SOX18P35713 384 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 EHHADHQ08426 723 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 ORC1Q13415 861 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 PRRT3Q5FWE3 981 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 PERM1Q5SV97 790 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 C20orf204Q6ZNR8 217 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 FAM35AQ86V20 835 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 TTC16Q8NEE8 873 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 LPIN3Q9BQK8 851 aa7.13□□□□□ -1.27
CHD1-203ENST00000505657 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 ALAS2P22557 587 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 TRIM26Q12899 539 aaPredicted RBP7.12□□□□□ -1.27
CHD1-203ENST00000505657 PRSS36Q5K4E3 855 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 USPL1Q5W0Q7 1092 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 PSAPL1Q6NUJ1 521 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 TMC1Q8TDI8 760 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 SNX29Q8TEQ0 813 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 NUDT8Q8WV74 236 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 NIF3L1Q9GZT8 377 aa7.12□□□□□ -1.27
CHD1-203ENST00000505657 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 SPDYE3A6NKU9 549 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 M0R082 166 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 PHACTR2O75167 634 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 POLR3DP05423 398 aaPredicted RBP7.11□□□□□ -1.27
CHD1-203ENST00000505657 EIF2AK2P19525 551 aaKnown RBP7.11□□□□□ -1.27
CHD1-203ENST00000505657 SIK1P57059 783 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 ATP11AP98196 1134 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 COL9A3Q14050 684 aaPredicted RBP7.11□□□□□ -1.27
CHD1-203ENST00000505657 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 ZNF417Q8TAU3 575 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 CITED4Q96RK1 184 aa7.11□□□□□ -1.27
CHD1-203ENST00000505657 ZNF587Q96SQ5 575 aaPredicted RBP7.11□□□□□ -1.27
CHD1-203ENST00000505657 KIF4AO95239 1232 aa7.1□□□□□ -1.27
CHD1-203ENST00000505657 CES1P23141 567 aa7.1□□□□□ -1.27
CHD1-203ENST00000505657 HYAL2Q12891 473 aa7.1□□□□□ -1.27
CHD1-203ENST00000505657 PDE3BQ13370 1112 aa7.1□□□□□ -1.27
CHD1-203ENST00000505657 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
CHD1-203ENST00000505657 ZFYVE28Q9HCC9 887 aa7.1□□□□□ -1.27
CHD1-203ENST00000505657 SALL4Q9UJQ4 1053 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms