RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 HMG20BQ9P0W2 317 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 KDRP35968 1356 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 STRCQ7RTU9 1775 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 LRRC37A3O60309 1634 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 ETF1P62495 437 aaKnown RBP18.57■□□□□ 0.56
PRDM5-207ENST00000505484 ATL3Q6DD88 541 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 CCDC73Q6ZRK6 1079 aa18.57■□□□□ 0.56
PRDM5-207ENST00000505484 DDX54Q8TDD1 881 aaKnown RBP18.57■□□□□ 0.56
PRDM5-207ENST00000505484 CCAR1Q8IX12 1150 aaKnown RBP18.56■□□□□ 0.56
PRDM5-207ENST00000505484 PLCD3Q8N3E9 789 aa18.56■□□□□ 0.56
PRDM5-207ENST00000505484 KINO60870 393 aaKnown RBP18.56■□□□□ 0.56
PRDM5-207ENST00000505484 NLRP6P59044 892 aa18.56■□□□□ 0.56
PRDM5-207ENST00000505484 LRRN4CLQ8ND94 238 aa18.56■□□□□ 0.56
PRDM5-207ENST00000505484 SFPQP23246 707 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRDM5-207ENST00000505484 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 ABTB2Q8N961 1025 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 BRF1Q92994 677 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 PEAK1Q9H792 1746 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 USP31Q70CQ4 1352 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 EFCAB8A8MWE9 144 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 FAM160A1Q05DH4 1040 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 MTX1Q13505 466 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 CCDC158Q5M9N0 1113 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 ERC1Q8IUD2 1116 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 AOPEPQ8N6M6 819 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 BPIFA3Q9BQP9 254 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 RASSF4Q9H2L5 321 aa18.55■□□□□ 0.56
PRDM5-207ENST00000505484 H3BQV1 296 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
PRDM5-207ENST00000505484 IFFO2Q5TF58 517 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 ENGASEQ8NFI3 743 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
PRDM5-207ENST00000505484 TADA3O75528 432 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 ADD1P35611 737 aaKnown RBP18.54■□□□□ 0.56
PRDM5-207ENST00000505484 PSME1Q06323 249 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 ARMCX5Q6P1M9 558 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 TRERF1Q96PN7 1200 aa18.54■□□□□ 0.56
PRDM5-207ENST00000505484 MNS1Q8NEH6 495 aa18.53■□□□□ 0.56
PRDM5-207ENST00000505484 NECTIN2Q92692 538 aa18.53■□□□□ 0.56
PRDM5-207ENST00000505484 POLR3GO15318 223 aaPredicted RBP18.53■□□□□ 0.56
PRDM5-207ENST00000505484 IFIT2P09913 472 aaKnown RBP18.53■□□□□ 0.56
PRDM5-207ENST00000505484 NMIQ13287 307 aaPredicted RBP18.53■□□□□ 0.56
PRDM5-207ENST00000505484 KRT32Q14532 448 aa18.53■□□□□ 0.56
PRDM5-207ENST00000505484 NAA16Q6N069 864 aaPredicted RBP18.53■□□□□ 0.56
PRDM5-207ENST00000505484 KRBA2Q6ZNG9 492 aa18.53■□□□□ 0.56
PRDM5-207ENST00000505484 C19orf44Q9H6X5 657 aa18.53■□□□□ 0.56
PRDM5-207ENST00000505484 PSD3Q9NYI0 1048 aa18.53■□□□□ 0.56
PRDM5-207ENST00000505484 JCADQ9P266 1359 aa18.52■□□□□ 0.56
PRDM5-207ENST00000505484 LRRFIP1Q32MZ4 808 aaKnown RBP18.52■□□□□ 0.56
PRDM5-207ENST00000505484 TAF7LQ5H9L4 462 aa18.52■□□□□ 0.56
PRDM5-207ENST00000505484 GOLPH3LQ9H4A5 285 aa18.52■□□□□ 0.56
PRDM5-207ENST00000505484 DNAI1Q9UI46 699 aa18.52■□□□□ 0.56
PRDM5-207ENST00000505484 NWD1Q149M9 1564 aa18.52■□□□□ 0.55
PRDM5-207ENST00000505484 ANKARQ7Z5J8 1434 aa18.52■□□□□ 0.55
PRDM5-207ENST00000505484 NBPF7P0C2Y1 421 aaPredicted RBP18.52■□□□□ 0.55
PRDM5-207ENST00000505484 HOMER1Q86YM7 354 aa18.52■□□□□ 0.55
PRDM5-207ENST00000505484 FAM227BQ96M60 508 aa18.52■□□□□ 0.55
PRDM5-207ENST00000505484 LLPHQ9BRT6 129 aaKnown RBP18.52■□□□□ 0.55
PRDM5-207ENST00000505484 JAK2O60674 1132 aa18.51■□□□□ 0.55
PRDM5-207ENST00000505484 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
PRDM5-207ENST00000505484 ZSCAN26Q16670 478 aa18.51■□□□□ 0.55
PRDM5-207ENST00000505484 CTR9Q6PD62 1173 aa18.51■□□□□ 0.55
PRDM5-207ENST00000505484 SMARCE1Q969G3 411 aa18.51■□□□□ 0.55
PRDM5-207ENST00000505484 TNNT3P45378 269 aaPredicted RBP18.5■□□□□ 0.55
PRDM5-207ENST00000505484 STK3Q13188 491 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 AK7Q96M32 723 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 MED23Q9ULK4 1368 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 TBC1D8O95759 1140 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 BEND3Q5T5X7 828 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 TMC6Q7Z403 805 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
PRDM5-207ENST00000505484 XPO4Q9C0E2 1151 aaKnown RBP18.5■□□□□ 0.55
PRDM5-207ENST00000505484 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
PRDM5-207ENST00000505484 ATF3P18847 181 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 OAS2P29728 719 aaKnown RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 IRX3P78415 501 aaPredicted RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 SMARCC2Q8TAQ2 1214 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 GOLGA5Q8TBA6 731 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 EXOC4Q96A65 974 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 ST5P78524 1137 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 SMC1AQ14683 1233 aaKnown RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 CC2D1AQ6P1N0 951 aaPredicted RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 TRIM65Q6PJ69 517 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 GPR161Q8N6U8 529 aaKnown RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 IQUBQ8NA54 791 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 CHMP4AQ9BY43 222 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
PRDM5-207ENST00000505484 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
PRDM5-207ENST00000505484 SMC2O95347 1197 aa18.48■□□□□ 0.55
PRDM5-207ENST00000505484 USPL1Q5W0Q7 1092 aa18.48■□□□□ 0.55
PRDM5-207ENST00000505484 FCHSD1Q86WN1 690 aa18.48■□□□□ 0.55
PRDM5-207ENST00000505484 IFNKQ9P0W0 207 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms