RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 SSH2Q76I76 1423 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 TTC41PQ6P2S7 1318 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 QRICH2Q9H0J4 1663 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 DIP2BQ9P265 1576 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 RPAP1Q9BWH6 1393 aaPredicted RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 RPS6KB1P23443 525 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 HAND2P61296 217 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 PLEKHO1Q53GL0 409 aaPredicted RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 CCDC34Q96HJ3 373 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 TTC14Q96N46 770 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 ZSCAN16Q9H4T2 348 aaPredicted RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 EDC4Q6P2E9 1401 aaKnown RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 A0A0D9SFI3 127 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 USP27XA6NNY8 438 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 GCP02774 474 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 C11orf57Q6ZUT1 292 aaPredicted RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 PI4K2BQ8TCG2 481 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 DBF4Q9UBU7 674 aaPredicted RBP9.28□□□□□ -0.92
PROM1-206ENST00000505450 CTNNA3Q9UI47 895 aa9.28□□□□□ -0.92
PROM1-206ENST00000505450 GNG11P61952 73 aa9.27□□□□□ -0.92
PROM1-206ENST00000505450 FKBP4Q02790 459 aaKnown RBP eCLIP9.27□□□□□ -0.92
PROM1-206ENST00000505450 CPLX2Q6PUV4 134 aaKnown RBP9.27□□□□□ -0.92
PROM1-206ENST00000505450 NFXL1Q6ZNB6 911 aa9.27□□□□□ -0.92
PROM1-206ENST00000505450 TOP1P11387 765 aaKnown RBP9.27□□□□□ -0.93
PROM1-206ENST00000505450 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
PROM1-206ENST00000505450 PIP4K2AP48426 406 aaPredicted RBP9.27□□□□□ -0.93
PROM1-206ENST00000505450 TRIM29Q14134 588 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 C8orf76Q96K31 380 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 AOX1Q06278 1338 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 KCNQ3O43525 872 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 LMAN1P49257 510 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 TRDNQ13061 729 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 LGR6Q9HBX8 967 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 ST7Q9NRC1 585 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 HSP90B2PQ58FF3 399 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 FBXO38Q6PIJ6 1188 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 CPLX3Q8WVH0 158 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 MYD88Q99836 296 aa9.27□□□□□ -0.93
PROM1-206ENST00000505450 GOLIM4O00461 696 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 CCP110O43303 1012 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 PTPN21Q16825 1174 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 TDRD7Q8NHU6 1098 aaKnown RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 CCDC85AQ96PX6 553 aaPredicted RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 TM6SF1Q9BZW5 370 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 DDX41Q9UJV9 622 aaKnown RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 PTPDC1A2A3K4 754 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 UBASH3AP57075 661 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 PDE4CQ08493 712 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 ANKRD24Q8TF21 1146 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 CHMP4CQ96CF2 233 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 EAF2Q96CJ1 260 aaPredicted RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 UTP14AQ9BVJ6 771 aaKnown RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 CARD6Q9BX69 1037 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 ZPR1O75312 459 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 DEFB132Q7Z7B7 95 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 USP28Q96RU2 1077 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 SNRKQ9NRH2 765 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 HMG20BQ9P0W2 317 aa9.26□□□□□ -0.93
PROM1-206ENST00000505450 U3KPZ7 1027 aaPredicted RBP9.26□□□□□ -0.93
PROM1-206ENST00000505450 ATP5J2-PTCD1G3V325 749 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 LEKR1Q6ZMV7 388 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 SEC62Q99442 399 aaKnown RBP9.25□□□□□ -0.93
PROM1-206ENST00000505450 SHROOM2Q13796 1616 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 SHPRHQ149N8 1683 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 TCHHQ07283 1943 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 GRM8O00222 908 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 MCM6Q14566 821 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
PROM1-206ENST00000505450 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 ANKRD7Q92527 254 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 PGBD1Q96JS3 809 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 XPO4Q9C0E2 1151 aaKnown RBP9.25□□□□□ -0.93
PROM1-206ENST00000505450 BICC1Q9H694 974 aaKnown RBP9.25□□□□□ -0.93
PROM1-206ENST00000505450 ORC3Q9UBD5 711 aaPredicted RBP9.25□□□□□ -0.93
PROM1-206ENST00000505450 EN1Q05925 392 aaPredicted RBP9.25□□□□□ -0.93
PROM1-206ENST00000505450 CCDC150Q8NCX0 1101 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 CCDC102AQ96A19 550 aa9.25□□□□□ -0.93
PROM1-206ENST00000505450 JCADQ9P266 1359 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 CASQ1P31415 396 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 TERF2Q15554 542 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 UBE3BQ7Z3V4 1068 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 EFCAB6Q5THR3 1501 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 EPB41L2O43491 1005 aaKnown RBP9.24□□□□□ -0.93
PROM1-206ENST00000505450 FAM160A1Q05DH4 1040 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 MSL1Q68DK7 614 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 KLHL10Q6JEL2 608 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 C10orf67Q8IYJ2 551 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
PROM1-206ENST00000505450 CBFA2T2O43439 604 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 GLI2P10070 1586 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 DHX16O60231 1041 aaKnown RBP9.24□□□□□ -0.93
PROM1-206ENST00000505450 RFC4P35249 363 aa9.24□□□□□ -0.93
PROM1-206ENST00000505450 EVCP57679 992 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms