RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 AOC3Q16853 763 aa21.35■■□□□ 1.01
SYNE4-207ENST00000505054 ALDH1L1O75891 902 aa21.34■■□□□ 1.01
SYNE4-207ENST00000505054 UBE3BQ7Z3V4 1068 aa21.34■■□□□ 1.01
SYNE4-207ENST00000505054 SUPT20HQ8NEM7 779 aa21.34■■□□□ 1.01
SYNE4-207ENST00000505054 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
SYNE4-207ENST00000505054 ECE1P42892 770 aa21.33■■□□□ 1.01
SYNE4-207ENST00000505054 ARHGAP45Q92619 1136 aa21.33■■□□□ 1.01
SYNE4-207ENST00000505054 RTFDC1Q9BY42 306 aaPredicted RBP21.33■■□□□ 1.01
SYNE4-207ENST00000505054 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
SYNE4-207ENST00000505054 ADARB2Q9NS39 739 aaKnown RBP21.33■■□□□ 1.01
SYNE4-207ENST00000505054 GPRC5DQ9NZD1 345 aa21.33■■□□□ 1.01
SYNE4-207ENST00000505054 FMR1Q06787 632 aaKnown RBP eCLIP21.32■■□□□ 1
SYNE4-207ENST00000505054 SF3B3Q15393 1217 aaKnown RBP21.32■■□□□ 1
SYNE4-207ENST00000505054 PAXIP1Q6ZW49 1069 aaPredicted RBP21.32■■□□□ 1
SYNE4-207ENST00000505054 CAPNS2Q96L46 248 aa21.32■■□□□ 1
SYNE4-207ENST00000505054 TAF1P21675 1872 aa21.32■■□□□ 1
SYNE4-207ENST00000505054 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
SYNE4-207ENST00000505054 TRAF5O00463 557 aa21.31■■□□□ 1
SYNE4-207ENST00000505054 FRAT1Q92837 279 aaPredicted RBP21.31■■□□□ 1
SYNE4-207ENST00000505054 ZNRF3Q9ULT6 936 aa21.31■■□□□ 1
SYNE4-207ENST00000505054 TNNQ9UQP3 1299 aa21.31■■□□□ 1
SYNE4-207ENST00000505054 TLL2Q9Y6L7 1015 aa21.31■■□□□ 1
SYNE4-207ENST00000505054 GRM8O00222 908 aa21.3■■□□□ 1
SYNE4-207ENST00000505054 PDE8AO60658 829 aa21.3■■□□□ 1
SYNE4-207ENST00000505054 TRIM27P14373 513 aa21.3■■□□□ 1
SYNE4-207ENST00000505054 HSP90B1P14625 803 aaKnown RBP21.3■■□□□ 1
SYNE4-207ENST00000505054 DPP8Q6V1X1 898 aaPredicted RBP21.3■■□□□ 1
SYNE4-207ENST00000505054 COL4A1P02462 1669 aa21.3■■□□□ 1
SYNE4-207ENST00000505054 CXCL9Q07325 125 aa21.29■■□□□ 1
SYNE4-207ENST00000505054 CST9Q5W186 159 aa21.29■■□□□ 1
SYNE4-207ENST00000505054 CYP4F22Q6NT55 531 aa21.29■■□□□ 1
SYNE4-207ENST00000505054 ATF7IPQ6VMQ6 1270 aa21.29■■□□□ 1
SYNE4-207ENST00000505054 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
SYNE4-207ENST00000505054 PLA2G12BQ9BX93 195 aa21.29■■□□□ 1
SYNE4-207ENST00000505054 IPO8O15397 1037 aaKnown RBP21.28■■□□□ 1
SYNE4-207ENST00000505054 BBOX1O75936 387 aa21.28■■□□□ 1
SYNE4-207ENST00000505054 GMPSP49915 693 aaPredicted RBP21.28■■□□□ 1
SYNE4-207ENST00000505054 CTSWP56202 376 aa21.28■■□□□ 1
SYNE4-207ENST00000505054 KIAA2012Q0VF49 1180 aa21.28■■□□□ 1
SYNE4-207ENST00000505054 SP8Q8IXZ3 490 aa21.28■■□□□ 1
SYNE4-207ENST00000505054 CCT4P50991 539 aaKnown RBP21.27■■□□□ 1
SYNE4-207ENST00000505054 GRM1Q13255 1194 aa21.27■■□□□ 1
SYNE4-207ENST00000505054 CIAPIN1Q6FI81 312 aa21.27■■□□□ 1
SYNE4-207ENST00000505054 DDX46Q7L014 1031 aaKnown RBP21.27■■□□□ 1
SYNE4-207ENST00000505054 MPNDQ8N594 471 aa21.27■■□□□ 1
SYNE4-207ENST00000505054 ABHD8Q96I13 439 aa21.27■■□□□ 1
SYNE4-207ENST00000505054 GPR101Q96P66 508 aaPredicted RBP21.27■■□□□ 1
SYNE4-207ENST00000505054 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
SYNE4-207ENST00000505054 RCAN3Q9UKA8 241 aa21.27■■□□□ 1
SYNE4-207ENST00000505054 UTYO14607 1347 aa21.27■□□□□ 0.99
SYNE4-207ENST00000505054 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
SYNE4-207ENST00000505054 GRAPQ13588 217 aa21.26■□□□□ 0.99
SYNE4-207ENST00000505054 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
SYNE4-207ENST00000505054 TTLL11Q8NHH1 800 aa21.26■□□□□ 0.99
SYNE4-207ENST00000505054 GRAPLQ8TC17 118 aaPredicted RBP21.26■□□□□ 0.99
SYNE4-207ENST00000505054 CCDC85AQ96PX6 553 aaPredicted RBP21.26■□□□□ 0.99
SYNE4-207ENST00000505054 TNIP1Q15025 636 aa21.25■□□□□ 0.99
SYNE4-207ENST00000505054 CCDC152Q4G0S7 254 aa21.25■□□□□ 0.99
SYNE4-207ENST00000505054 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
SYNE4-207ENST00000505054 USP44Q9H0E7 712 aa21.25■□□□□ 0.99
SYNE4-207ENST00000505054 CELF2O95319 508 aaKnown RBP21.24■□□□□ 0.99
SYNE4-207ENST00000505054 MAP2K2P36507 400 aa21.24■□□□□ 0.99
SYNE4-207ENST00000505054 EPHA10Q5JZY3 1008 aa21.24■□□□□ 0.99
SYNE4-207ENST00000505054 INTS3Q68E01 1043 aaKnown RBP21.24■□□□□ 0.99
SYNE4-207ENST00000505054 SAPCD2Q86UD0 394 aa21.24■□□□□ 0.99
SYNE4-207ENST00000505054 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
SYNE4-207ENST00000505054 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
SYNE4-207ENST00000505054 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
SYNE4-207ENST00000505054 SEC31BQ9NQW1 1179 aa21.24■□□□□ 0.99
SYNE4-207ENST00000505054 PGAP2Q9UHJ9 254 aa21.24■□□□□ 0.99
SYNE4-207ENST00000505054 RTL9Q8NET4 1388 aa21.23■□□□□ 0.99
SYNE4-207ENST00000505054 FOXO4P98177 505 aa21.23■□□□□ 0.99
SYNE4-207ENST00000505054 KAZALD1Q96I82 304 aa21.23■□□□□ 0.99
SYNE4-207ENST00000505054 SUCLG2Q96I99 432 aa21.23■□□□□ 0.99
SYNE4-207ENST00000505054 HHIPL1Q96JK4 782 aa21.23■□□□□ 0.99
SYNE4-207ENST00000505054 GLIS2Q9BZE0 524 aaPredicted RBP21.23■□□□□ 0.99
SYNE4-207ENST00000505054 GREM2Q9H772 168 aa21.23■□□□□ 0.99
SYNE4-207ENST00000505054 RAD17O75943 681 aa21.22■□□□□ 0.99
SYNE4-207ENST00000505054 CSF1RP07333 972 aa21.22■□□□□ 0.99
SYNE4-207ENST00000505054 MYH3P11055 1940 aa21.21■□□□□ 0.99
SYNE4-207ENST00000505054 AOC2O75106 756 aa21.21■□□□□ 0.99
SYNE4-207ENST00000505054 FAM161AQ3B820 660 aa21.21■□□□□ 0.99
SYNE4-207ENST00000505054 TRPM4Q8TD43 1214 aa21.21■□□□□ 0.99
SYNE4-207ENST00000505054 YDJCA8MPS7 323 aa21.2■□□□□ 0.98
SYNE4-207ENST00000505054 CA12O43570 354 aa21.2■□□□□ 0.98
SYNE4-207ENST00000505054 RLBP1P12271 317 aa21.2■□□□□ 0.98
SYNE4-207ENST00000505054 TMEM57Q8N5G2 664 aa21.2■□□□□ 0.98
SYNE4-207ENST00000505054 HIRAP54198 1017 aaPredicted RBP21.19■□□□□ 0.98
SYNE4-207ENST00000505054 CDC37L1Q7L3B6 337 aa21.19■□□□□ 0.98
SYNE4-207ENST00000505054 RPS8P62241 208 aaKnown RBP21.18■□□□□ 0.98
SYNE4-207ENST00000505054 LMBR1LQ6UX01 489 aa21.18■□□□□ 0.98
SYNE4-207ENST00000505054 DZIP1LQ8IYY4 767 aaKnown RBP21.18■□□□□ 0.98
SYNE4-207ENST00000505054 MEIS3Q99687 375 aa21.18■□□□□ 0.98
SYNE4-207ENST00000505054 ZNF408Q9H9D4 720 aa21.18■□□□□ 0.98
SYNE4-207ENST00000505054 CNOT7Q9UIV1 285 aaKnown RBP21.18■□□□□ 0.98
SYNE4-207ENST00000505054 CASP8AP2Q9UKL3 1982 aa21.17■□□□□ 0.98
SYNE4-207ENST00000505054 H7C1D1 291 aa21.17■□□□□ 0.98
SYNE4-207ENST00000505054 ITGA6P23229 1130 aa21.17■□□□□ 0.98
SYNE4-207ENST00000505054 MICALL2Q8IY33 904 aa21.17■□□□□ 0.98
SYNE4-207ENST00000505054 FTSJ3Q8IY81 847 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms