RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 TMEM88BA6NKF7 163 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 UBAP1LF5GYI3 381 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 PSAPP07602 524 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 ATCAYQ86WG3 371 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 CCDC82Q8N4S0 544 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 DTWD1Q8N5C7 304 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 GPR152Q8TDT2 470 aa9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.64□□□□□ -0.87
DEPDC1B-203ENST00000505017 DLL1O00548 723 aa9.63□□□□□ -0.87
DEPDC1B-203ENST00000505017 NRG1Q02297 640 aaPredicted RBP9.63□□□□□ -0.87
DEPDC1B-203ENST00000505017 OR13H1Q8NG92 308 aa9.63□□□□□ -0.87
DEPDC1B-203ENST00000505017 TRIM33Q9UPN9 1127 aa9.63□□□□□ -0.87
DEPDC1B-203ENST00000505017 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
DEPDC1B-203ENST00000505017 CYP2E1P05181 493 aaPredicted RBP9.61□□□□□ -0.87
DEPDC1B-203ENST00000505017 NOS3P29474 1203 aa9.61□□□□□ -0.87
DEPDC1B-203ENST00000505017 GDF6Q6KF10 455 aaPredicted RBP9.61□□□□□ -0.87
DEPDC1B-203ENST00000505017 TM4SF5O14894 197 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 ARID4AP29374 1257 aaPredicted RBP9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 ATP11AP98196 1134 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 SETDB1Q15047 1291 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 IL22RA1Q8N6P7 574 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 WFDC12Q8WWY7 111 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 USP21Q9UK80 565 aa9.6□□□□□ -0.87
DEPDC1B-203ENST00000505017 CARNS1A5YM72 827 aa9.59□□□□□ -0.87
DEPDC1B-203ENST00000505017 GHRHP01286 108 aa9.58□□□□□ -0.88
DEPDC1B-203ENST00000505017 IREB2P48200 963 aaKnown RBP9.58□□□□□ -0.88
DEPDC1B-203ENST00000505017 PHLDB3Q6NSJ2 640 aa9.58□□□□□ -0.88
DEPDC1B-203ENST00000505017 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
DEPDC1B-203ENST00000505017 MEGF10Q96KG7 1140 aa9.58□□□□□ -0.88
DEPDC1B-203ENST00000505017 TMEM63CQ9P1W3 806 aa9.58□□□□□ -0.88
DEPDC1B-203ENST00000505017 KIF4AO95239 1232 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 H2AFB1P0C5Y9 115 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 H2AFB2P0C5Z0 115 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 SSFA2P28290 1259 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 ZMYM1Q5SVZ6 1142 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 TP53INP1Q96A56 240 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 NUDT16Q96DE0 195 aaKnown RBP9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 CNTN3Q9P232 1028 aa9.57□□□□□ -0.88
DEPDC1B-203ENST00000505017 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
DEPDC1B-203ENST00000505017 HELQQ8TDG4 1101 aa9.56□□□□□ -0.88
DEPDC1B-203ENST00000505017 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
DEPDC1B-203ENST00000505017 FAM13BQ9NYF5 915 aa9.56□□□□□ -0.88
DEPDC1B-203ENST00000505017 ALX3O95076 343 aa9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 CEP120Q8N960 986 aa9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 ABTB2Q8N961 1025 aa9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 RASSF4Q9H2L5 321 aa9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 ELP3Q9H9T3 547 aa9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 ABI2Q9NYB9 513 aaPredicted RBP9.55□□□□□ -0.88
DEPDC1B-203ENST00000505017 A6NHS1 94 aa9.54□□□□□ -0.88
DEPDC1B-203ENST00000505017 GTF3C2Q8WUA4 911 aaPredicted RBP9.54□□□□□ -0.88
DEPDC1B-203ENST00000505017 ACPPP15309 386 aa9.53□□□□□ -0.88
DEPDC1B-203ENST00000505017 HYAL2Q12891 473 aa9.53□□□□□ -0.88
DEPDC1B-203ENST00000505017 EDEM1Q92611 657 aa9.53□□□□□ -0.88
DEPDC1B-203ENST00000505017 FNDC3AQ9Y2H6 1198 aaKnown RBP9.53□□□□□ -0.88
DEPDC1B-203ENST00000505017 MPSTP25325 297 aa9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 TTC39BQ5VTQ0 682 aaPredicted RBP9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 PDE12Q6L8Q7 609 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 TXNDC11Q6PKC3 985 aa9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 DZIP1LQ8IYY4 767 aaKnown RBP9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 LACRTQ9GZZ8 138 aa9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 KCNK4Q9NYG8 393 aa9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 KANSL3Q9P2N6 904 aa9.52□□□□□ -0.89
DEPDC1B-203ENST00000505017 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 LINC01387J3KSC0 135 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 PDGFAP04085 211 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 EIF1AXP47813 144 aaKnown RBP9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 XKR5Q6UX68 686 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 TMEM130Q8N3G9 435 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 C1orf127Q8N9H9 656 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
DEPDC1B-203ENST00000505017 NFKBIEO00221 500 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 WISP1O95388 367 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 DNM1Q05193 864 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 Q6ZS46 218 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 POP1Q99575 1024 aaKnown RBP9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 PBX4Q9BYU1 374 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 CHRDQ9H2X0 955 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 SALL4Q9UJQ4 1053 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
DEPDC1B-203ENST00000505017 NPR3P17342 541 aa9.49□□□□□ -0.89
DEPDC1B-203ENST00000505017 ZNF438Q7Z4V0 828 aa9.49□□□□□ -0.89
DEPDC1B-203ENST00000505017 AGGF1Q8N302 714 aaeCLIP9.49□□□□□ -0.89
DEPDC1B-203ENST00000505017 AKTIPQ9H8T0 292 aa9.49□□□□□ -0.89
DEPDC1B-203ENST00000505017 SH2B1Q9NRF2 756 aaPredicted RBP9.49□□□□□ -0.89
DEPDC1B-203ENST00000505017 TRPA1O75762 1119 aa9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 PPP1R15AO75807 674 aaPredicted RBP9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 EPHA1P21709 976 aa9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 HHIPQ96QV1 700 aa9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
DEPDC1B-203ENST00000505017 CDC25BP30305 580 aa9.47□□□□□ -0.89
DEPDC1B-203ENST00000505017 CARD10Q9BWT7 1032 aa9.47□□□□□ -0.89
DEPDC1B-203ENST00000505017 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 MZF1P28698 734 aaPredicted RBP9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 CDC27P30260 824 aa9.46□□□□□ -0.9
DEPDC1B-203ENST00000505017 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms