RNA–Protein interactions for RNA: ENST00000504742.1

SLC4A9-202, Transcript of solute carrier family 4 member 9, humanhuman

TSL 3

Gene SLC4A9, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A9-202ENST00000504742 RTL9Q8NET4 1388 aa16.76■□□□□ 0.27
SLC4A9-202ENST00000504742 POLR2AP24928 1970 aaKnown RBP16.75■□□□□ 0.27
SLC4A9-202ENST00000504742 PCDH10Q9P2E7 1040 aa16.75■□□□□ 0.27
SLC4A9-202ENST00000504742 SLC10A3P09131 477 aa16.74■□□□□ 0.27
SLC4A9-202ENST00000504742 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
SLC4A9-202ENST00000504742 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
SLC4A9-202ENST00000504742 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
SLC4A9-202ENST00000504742 PLBD2Q8NHP8 589 aa16.74■□□□□ 0.27
SLC4A9-202ENST00000504742 COL4A1P02462 1669 aa16.74■□□□□ 0.27
SLC4A9-202ENST00000504742 ASTN2O75129 1339 aaPredicted RBP16.73■□□□□ 0.27
SLC4A9-202ENST00000504742 AKAP11Q9UKA4 1901 aa16.73■□□□□ 0.27
SLC4A9-202ENST00000504742 HDGFL1Q5TGJ6 251 aa16.73■□□□□ 0.27
SLC4A9-202ENST00000504742 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
SLC4A9-202ENST00000504742 CDCA5Q96FF9 252 aa16.73■□□□□ 0.27
SLC4A9-202ENST00000504742 ZC3H12CQ9C0D7 883 aaKnown RBP16.73■□□□□ 0.27
SLC4A9-202ENST00000504742 IRS4O14654 1257 aaPredicted RBP16.72■□□□□ 0.27
SLC4A9-202ENST00000504742 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
SLC4A9-202ENST00000504742 CSRNP1Q96S65 589 aa16.72■□□□□ 0.27
SLC4A9-202ENST00000504742 ISCA1Q9BUE6 129 aa16.72■□□□□ 0.27
SLC4A9-202ENST00000504742 ANKIB1Q9P2G1 1089 aa16.72■□□□□ 0.27
SLC4A9-202ENST00000504742 UFL1O94874 794 aa16.71■□□□□ 0.27
SLC4A9-202ENST00000504742 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
SLC4A9-202ENST00000504742 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
SLC4A9-202ENST00000504742 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.27
SLC4A9-202ENST00000504742 VIL1P09327 827 aaKnown RBP16.7■□□□□ 0.26
SLC4A9-202ENST00000504742 SCARF1Q14162 830 aa16.7■□□□□ 0.26
SLC4A9-202ENST00000504742 RASAL3Q86YV0 1011 aa16.7■□□□□ 0.26
SLC4A9-202ENST00000504742 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
SLC4A9-202ENST00000504742 CHL1O00533 1208 aa16.69■□□□□ 0.26
SLC4A9-202ENST00000504742 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
SLC4A9-202ENST00000504742 GGA1Q9UJY5 639 aa16.69■□□□□ 0.26
SLC4A9-202ENST00000504742 SCN9AQ15858 1988 aa16.69■□□□□ 0.26
SLC4A9-202ENST00000504742 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
SLC4A9-202ENST00000504742 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
SLC4A9-202ENST00000504742 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
SLC4A9-202ENST00000504742 RIC3Q7Z5B4 369 aa16.67■□□□□ 0.26
SLC4A9-202ENST00000504742 REM2Q8IYK8 340 aaPredicted RBP16.67■□□□□ 0.26
SLC4A9-202ENST00000504742 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
SLC4A9-202ENST00000504742 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
SLC4A9-202ENST00000504742 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 MOB2Q70IA6 237 aa16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 AGBL3Q8NEM8 1001 aa16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 MYOZ2Q9NPC6 264 aa16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 HPS5Q9UPZ3 1129 aa16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
SLC4A9-202ENST00000504742 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 HOXB7P09629 217 aa16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 USP17L8P0C7I0 530 aa16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 FKBP1BP68106 108 aa16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
SLC4A9-202ENST00000504742 UBE2Q2LH0YL09 131 aa16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 PRPF38BQ5VTL8 546 aaKnown RBP16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 MYD88Q99836 296 aa16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
SLC4A9-202ENST00000504742 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
SLC4A9-202ENST00000504742 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
SLC4A9-202ENST00000504742 ZNF296Q8WUU4 475 aaPredicted RBP16.63■□□□□ 0.25
SLC4A9-202ENST00000504742 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
SLC4A9-202ENST00000504742 USP17L3A6NCW0 530 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 USP17L4A6NCW7 530 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 RALBP1Q15311 655 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 PKN2Q16513 984 aaKnown RBP16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 USP17L1Q7RTZ2 530 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 RUNDC1Q96C34 613 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 XDHP47989 1333 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 PITPNM2Q9BZ72 1349 aa16.62■□□□□ 0.25
SLC4A9-202ENST00000504742 PSME4Q14997 1843 aa16.61■□□□□ 0.25
SLC4A9-202ENST00000504742 PDE8AO60658 829 aa16.61■□□□□ 0.25
SLC4A9-202ENST00000504742 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
SLC4A9-202ENST00000504742 GMLQ99445 158 aa16.61■□□□□ 0.25
SLC4A9-202ENST00000504742 ZNF609O15014 1411 aa16.61■□□□□ 0.25
SLC4A9-202ENST00000504742 ELL2O00472 640 aaPredicted RBP16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 PCCAP05165 728 aaPredicted RBP16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 ATP2B4P23634 1241 aa16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 NF2P35240 595 aa16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 NBPF9Q3BBW0 867 aa16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 PODNQ7Z5L7 613 aa16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 MXD3Q9BW11 206 aa16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 MBIPQ9NS73 344 aa16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
SLC4A9-202ENST00000504742 PRKG1Q13976 671 aa16.59■□□□□ 0.25
SLC4A9-202ENST00000504742 OGFOD1Q8N543 542 aa16.59■□□□□ 0.25
SLC4A9-202ENST00000504742 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
SLC4A9-202ENST00000504742 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.59■□□□□ 0.25
SLC4A9-202ENST00000504742 WTIPA6NIX2 430 aaPredicted RBP16.58■□□□□ 0.24
SLC4A9-202ENST00000504742 GPR25O00155 361 aa16.58■□□□□ 0.24
SLC4A9-202ENST00000504742 TNRC18O15417 2968 aaPredicted RBP16.57■□□□□ 0.24
SLC4A9-202ENST00000504742 SPEF2Q9C093 1822 aa16.57■□□□□ 0.24
SLC4A9-202ENST00000504742 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
SLC4A9-202ENST00000504742 SASH1O94885 1247 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms