RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
CYSTM1-202ENST00000504227 PPEF1O14829 653 aaPredicted RBP17.09■□□□□ 0.33
CYSTM1-202ENST00000504227 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
CYSTM1-202ENST00000504227 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
CYSTM1-202ENST00000504227 SASH1O94885 1247 aa17.08■□□□□ 0.32
CYSTM1-202ENST00000504227 NUCB1Q02818 461 aa17.08■□□□□ 0.32
CYSTM1-202ENST00000504227 TFCP2Q12800 502 aa17.08■□□□□ 0.32
CYSTM1-202ENST00000504227 TTLL6Q8N841 843 aa17.08■□□□□ 0.32
CYSTM1-202ENST00000504227 ANKRD2Q9GZV1 360 aa17.08■□□□□ 0.32
CYSTM1-202ENST00000504227 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
CYSTM1-202ENST00000504227 KCNA3P22001 575 aa17.07■□□□□ 0.32
CYSTM1-202ENST00000504227 CHRNDQ07001 517 aa17.07■□□□□ 0.32
CYSTM1-202ENST00000504227 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
CYSTM1-202ENST00000504227 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
CYSTM1-202ENST00000504227 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
CYSTM1-202ENST00000504227 KIF13BQ9NQT8 1826 aa17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 SMARCA5O60264 1052 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 CLASRPQ8N2M8 674 aaKnown RBP17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 FHDC1Q9C0D6 1143 aaPredicted RBP17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 IL1RAPL2Q9NP60 686 aa17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 GPR108Q9NPR9 543 aa17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
CYSTM1-202ENST00000504227 TAF1P21675 1872 aa17.05■□□□□ 0.32
CYSTM1-202ENST00000504227 PDE8BO95263 885 aa17.05■□□□□ 0.32
CYSTM1-202ENST00000504227 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
CYSTM1-202ENST00000504227 LNPKQ9C0E8 428 aa17.05■□□□□ 0.32
CYSTM1-202ENST00000504227 ANKIB1Q9P2G1 1089 aa17.05■□□□□ 0.32
CYSTM1-202ENST00000504227 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
CYSTM1-202ENST00000504227 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
CYSTM1-202ENST00000504227 TAF5LO75529 589 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 KCNJ4P48050 445 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 AACSQ86V21 672 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 VGLL2Q8N8G2 317 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 NLGN2Q8NFZ4 835 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 COL4A1P02462 1669 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 LRP5O75197 1615 aa17.03■□□□□ 0.32
CYSTM1-202ENST00000504227 XDHP47989 1333 aa17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 GRIPAP1Q4V328 841 aa17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 NEUROD6Q96NK8 337 aa17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 NSFL1CQ9UNZ2 370 aaKnown RBP17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 LEMD3Q9Y2U8 911 aa17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
CYSTM1-202ENST00000504227 SLC5A1P13866 664 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 ATP2B4P23634 1241 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 TIMM10P62072 90 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 GPSM2P81274 684 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 UBE4AQ14139 1066 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 MPNDQ8N594 471 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 LPIN2Q92539 896 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 SYT17Q9BSW7 474 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 GGA1Q9UJY5 639 aa17.01■□□□□ 0.31
CYSTM1-202ENST00000504227 SPEF2Q9C093 1822 aa17■□□□□ 0.31
CYSTM1-202ENST00000504227 A0A1B0GUL7 405 aa17■□□□□ 0.31
CYSTM1-202ENST00000504227 C21orf2O43822 256 aa17■□□□□ 0.31
CYSTM1-202ENST00000504227 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
CYSTM1-202ENST00000504227 DPP8Q6V1X1 898 aaPredicted RBP17■□□□□ 0.31
CYSTM1-202ENST00000504227 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
CYSTM1-202ENST00000504227 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
CYSTM1-202ENST00000504227 SLX4Q8IY92 1834 aa17■□□□□ 0.31
CYSTM1-202ENST00000504227 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 FGFR2P21802 821 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 OLFM4Q6UX06 510 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 RTKN2Q8IZC4 609 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 GPATCH3Q96I76 525 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 WWC3Q9ULE0 1092 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
CYSTM1-202ENST00000504227 DLEC1Q9Y238 1755 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 C6orf229H3BNL8 230 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 SNAP23O00161 211 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 UFL1O94874 794 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 CCDC93Q567U6 631 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 XAGE2Q96GT9 111 aa16.98■□□□□ 0.31
CYSTM1-202ENST00000504227 KIAA1551Q9HCM1 1747 aa16.97■□□□□ 0.31
CYSTM1-202ENST00000504227 PDE4AP27815 886 aa16.97■□□□□ 0.31
CYSTM1-202ENST00000504227 TBC1D16Q8TBP0 767 aa16.97■□□□□ 0.31
CYSTM1-202ENST00000504227 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
CYSTM1-202ENST00000504227 ZNF609O15014 1411 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 MX1P20591 662 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 ADORA1P30542 326 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 RGS3P49796 1198 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms