RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 F13A1P00488 732 aa18.58■□□□□ 0.57
HMGXB3-202ENST00000503427 NYXQ9GZU5 481 aa18.58■□□□□ 0.57
HMGXB3-202ENST00000503427 PRDM10Q9NQV6 1147 aa18.58■□□□□ 0.57
HMGXB3-202ENST00000503427 TNIP1Q15025 636 aa18.58■□□□□ 0.57
HMGXB3-202ENST00000503427 CCDC96Q2M329 555 aa18.58■□□□□ 0.57
HMGXB3-202ENST00000503427 HAND2P61296 217 aa18.58■□□□□ 0.56
HMGXB3-202ENST00000503427 PPP4R3BQ5MIZ7 849 aa18.58■□□□□ 0.56
HMGXB3-202ENST00000503427 MICU3Q86XE3 530 aa18.58■□□□□ 0.56
HMGXB3-202ENST00000503427 NOLC1Q14978 699 aaKnown RBP eCLIP18.58■□□□□ 0.56
HMGXB3-202ENST00000503427 KCNG4Q8TDN1 519 aa18.58■□□□□ 0.56
HMGXB3-202ENST00000503427 CALCOCO1Q9P1Z2 691 aa18.58■□□□□ 0.56
HMGXB3-202ENST00000503427 TSPY2A6NKD2 308 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 PANK2Q9BZ23 570 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 ZKSCAN5Q9Y2L8 839 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 KRT23Q9C075 422 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 CHL1O00533 1208 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 HS1BP3Q53T59 392 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 LUZP1Q86V48 1076 aa18.57■□□□□ 0.56
HMGXB3-202ENST00000503427 ZMYM4Q5VZL5 1548 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 CETN2P41208 172 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 AMPD3Q01432 767 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 BMS1Q14692 1282 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 TMTC2Q8N394 836 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 SYKP43405 635 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 ANO6Q4KMQ2 910 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 ORAI2Q96SN7 254 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 HLA-DOAP06340 250 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 TCP11L1Q9NUJ3 509 aa18.56■□□□□ 0.56
HMGXB3-202ENST00000503427 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 RBM25P49756 843 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 KAT14Q9H8E8 782 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 KLF18A0A0U1RQI7 1052 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 ANKRD62A6NC57 917 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 MTIF2P46199 727 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 ZNF790Q6PG37 636 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 CUL5Q93034 780 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 INTS4Q96HW7 963 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 SLC26A6Q9BXS9 759 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
HMGXB3-202ENST00000503427 POLR3GO15318 223 aaPredicted RBP18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 TDRD12Q587J7 1177 aaKnown RBP18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 TPTE2Q6XPS3 522 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 FAM114A1Q8IWE2 563 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 DACT1Q9NYF0 836 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 CCDC144CPQ8IYA2 1237 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 CYP7A1P22680 504 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 GBP2P32456 591 aaPredicted RBP18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 ALS2CR12Q96Q35 445 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 PAG1Q9NWQ8 432 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 ZBTB7BO15156 539 aaPredicted RBP18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 CCDC186Q7Z3E2 898 aa18.54■□□□□ 0.56
HMGXB3-202ENST00000503427 GNG11P61952 73 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 PLEKHM2Q8IWE5 1019 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 CALML4Q96GE6 196 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 BTG4Q9NY30 223 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 TRIM35Q9UPQ4 493 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 UBA7P41226 1012 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 SAMD9LQ8IVG5 1584 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 BMP15O95972 392 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 DNM1Q05193 864 aaKnown RBP18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 SKILP12757 684 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 DESP17661 470 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 UBASH3AP57075 661 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 ESR2Q92731 530 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 EHMT1Q9H9B1 1298 aa18.53■□□□□ 0.56
HMGXB3-202ENST00000503427 KDM5DQ9BY66 1539 aa18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 WTAPQ15007 396 aa18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.562e-6■■□□□ 12.3
HMGXB3-202ENST00000503427 NAA15Q9BXJ9 866 aaKnown RBP18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 SLC9C2Q5TAH2 1124 aa18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 ISM2Q6H9L7 571 aa18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 RTCBQ9Y3I0 505 aaKnown RBP18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 ZNF830Q96NB3 372 aaPredicted RBP18.52■□□□□ 0.56
HMGXB3-202ENST00000503427 CABP5Q9NP86 173 aa18.52■□□□□ 0.55
HMGXB3-202ENST00000503427 RAD50Q92878 1312 aa18.52■□□□□ 0.55
HMGXB3-202ENST00000503427 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.55
HMGXB3-202ENST00000503427 EZRP15311 586 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 PLBD2Q8NHP8 589 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 KDM5AP29375 1690 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 ZBTB43O43298 467 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 Q6ZUG5 572 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 TMX1Q9H3N1 280 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 ZNF219Q9P2Y4 722 aaPredicted RBP18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 SEC24BO95487 1268 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 TUBB4AP04350 444 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms