RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 LTBP1Q14766 1721 aa22.91■■□□□ 1.26
PDLIM7-209ENST00000503346 CCDC88AQ3V6T2 1871 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 C6orf229H3BNL8 230 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 NIM1KQ8IY84 436 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 EYA3Q99504 573 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 GGA1Q9UJY5 639 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 HDAC5Q9UQL6 1122 aa22.9■■□□□ 1.26
PDLIM7-209ENST00000503346 ZNF541Q9H0D2 1346 aa22.89■■□□□ 1.26
PDLIM7-209ENST00000503346 UFL1O94874 794 aa22.89■■□□□ 1.25
PDLIM7-209ENST00000503346 WASHC4Q2M389 1173 aa22.89■■□□□ 1.25
PDLIM7-209ENST00000503346 MEIS3Q99687 375 aa22.89■■□□□ 1.25
PDLIM7-209ENST00000503346 NMRK2Q9NPI5 230 aa22.89■■□□□ 1.25
PDLIM7-209ENST00000503346 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
PDLIM7-209ENST00000503346 ATP2B4P23634 1241 aa22.88■■□□□ 1.25
PDLIM7-209ENST00000503346 KIF3CO14782 793 aa22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 GNAI3P08754 354 aa22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 TAF7LQ5H9L4 462 aa22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 DZIP1LQ8IYY4 767 aaKnown RBP22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 TMEM57Q8N5G2 664 aa22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 YTHDC1Q96MU7 727 aaKnown RBP22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 ANKRD2Q9GZV1 360 aa22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 ZNRF3Q9ULT6 936 aa22.87■■□□□ 1.25
PDLIM7-209ENST00000503346 DDNO94850 711 aaPredicted RBP22.86■■□□□ 1.25
PDLIM7-209ENST00000503346 EIF6P56537 245 aaKnown RBP22.86■■□□□ 1.25
PDLIM7-209ENST00000503346 FTSJ3Q8IY81 847 aaKnown RBP22.86■■□□□ 1.25
PDLIM7-209ENST00000503346 ZNF594Q96JF6 807 aaPredicted RBP22.86■■□□□ 1.25
PDLIM7-209ENST00000503346 CHRNDQ07001 517 aa22.85■■□□□ 1.25
PDLIM7-209ENST00000503346 LDHAL6AQ6ZMR3 332 aa22.85■■□□□ 1.25
PDLIM7-209ENST00000503346 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
PDLIM7-209ENST00000503346 ZC3H12CQ9C0D7 883 aaKnown RBP22.85■■□□□ 1.25
PDLIM7-209ENST00000503346 RRAGCQ9HB90 399 aa22.85■■□□□ 1.25
PDLIM7-209ENST00000503346 LEMD3Q9Y2U8 911 aa22.85■■□□□ 1.25
PDLIM7-209ENST00000503346 RIMBP2O15034 1052 aa22.84■■□□□ 1.25
PDLIM7-209ENST00000503346 RLBP1P12271 317 aa22.84■■□□□ 1.25
PDLIM7-209ENST00000503346 GPC2Q8N158 579 aa22.84■■□□□ 1.25
PDLIM7-209ENST00000503346 L3MBTL3Q96JM7 780 aaPredicted RBP22.84■■□□□ 1.25
PDLIM7-209ENST00000503346 LRRFIP2Q9Y608 721 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-209ENST00000503346 POTECB2RU33 542 aa22.83■■□□□ 1.25
PDLIM7-209ENST00000503346 CNNM1Q9NRU3 951 aa22.83■■□□□ 1.25
PDLIM7-209ENST00000503346 VEGFAP15692 232 aaPredicted RBP22.82■■□□□ 1.24
PDLIM7-209ENST00000503346 WDR90Q96KV7 1748 aa22.82■■□□□ 1.24
PDLIM7-209ENST00000503346 ZNF804BA4D1E1 1349 aa22.82■■□□□ 1.24
PDLIM7-209ENST00000503346 MED23Q9ULK4 1368 aa22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 WTIPA6NIX2 430 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 YDJCA8MPS7 323 aa22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 MS4A1P11836 297 aa22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 RFX5P48382 616 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 CXCL9Q07325 125 aa22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 RIPOR2Q9Y4F9 1068 aa22.81■■□□□ 1.24
PDLIM7-209ENST00000503346 ECE2O60344 883 aa22.8■■□□□ 1.24
PDLIM7-209ENST00000503346 PUS3Q9BZE2 481 aaKnown RBP22.8■■□□□ 1.24
PDLIM7-209ENST00000503346 DBNDD1Q9H9R9 158 aa22.8■■□□□ 1.24
PDLIM7-209ENST00000503346 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
PDLIM7-209ENST00000503346 GNAI2P04899 355 aa22.79■■□□□ 1.24
PDLIM7-209ENST00000503346 DOK7Q18PE1 504 aa22.79■■□□□ 1.24
PDLIM7-209ENST00000503346 CIAPIN1Q6FI81 312 aa22.79■■□□□ 1.24
PDLIM7-209ENST00000503346 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
PDLIM7-209ENST00000503346 GJA3Q9Y6H8 435 aa22.79■■□□□ 1.24
PDLIM7-209ENST00000503346 IQCA1LA6NCM1 817 aa22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 TAF5LO75529 589 aa22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 PTPN12Q05209 780 aaKnown RBP22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 MTX1Q13505 466 aa22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 HELBQ8NG08 1087 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 KLHDC4Q8TBB5 520 aa22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 PANK1Q8TE04 598 aa22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 MROH5Q6ZUA9 1318 aa22.78■■□□□ 1.24
PDLIM7-209ENST00000503346 ZBTB7BO15156 539 aaPredicted RBP22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 RAD17O75943 681 aa22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 TOMM70O94826 608 aa22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 KCNJ4P48050 445 aa22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 TNIP1Q15025 636 aa22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 LRRC24Q50LG9 513 aa22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 C15orf52Q6ZUT6 534 aaKnown RBP22.77■■□□□ 1.24
PDLIM7-209ENST00000503346 G3V3G9 751 aa22.76■■□□□ 1.23
PDLIM7-209ENST00000503346 DCAF8Q5TAQ9 597 aa22.76■■□□□ 1.23
PDLIM7-209ENST00000503346 TXNRD3Q86VQ6 643 aa22.76■■□□□ 1.23
PDLIM7-209ENST00000503346 C16orf71Q8IYS4 520 aaPredicted RBP22.76■■□□□ 1.23
PDLIM7-209ENST00000503346 FBXO3Q9UK99 471 aa22.76■■□□□ 1.23
PDLIM7-209ENST00000503346 IRS2Q9Y4H2 1338 aa22.76■■□□□ 1.23
PDLIM7-209ENST00000503346 SNAP23O00161 211 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 PLIN1O60240 522 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 KLRK1P26718 216 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 SCNN1DP51172 638 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 C1QTNF8P60827 252 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 PODNQ7Z5L7 613 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 HACL1Q9UJ83 578 aa22.75■■□□□ 1.23
PDLIM7-209ENST00000503346 EYA2O00167 538 aa22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 UBE4AQ14139 1066 aa22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 RBM46Q8TBY0 533 aaKnown RBP22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 TAF1DQ9H5J8 278 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 COPRSQ9NQ92 184 aa22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 KCNQ5Q9NR82 932 aa22.74■■□□□ 1.23
PDLIM7-209ENST00000503346 PSMD14O00487 310 aa22.73■■□□□ 1.23
PDLIM7-209ENST00000503346 SRGAP3O43295 1099 aa22.73■■□□□ 1.23
PDLIM7-209ENST00000503346 CIAO1O76071 339 aa22.73■■□□□ 1.23
PDLIM7-209ENST00000503346 METTL24Q5JXM2 366 aa22.73■■□□□ 1.23
PDLIM7-209ENST00000503346 VGLL2Q8N8G2 317 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms