RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TNIP1Q15025 636 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 COL13A1Q5TAT6 717 aaPredicted RBP20.84■□□□□ 0.93
SCLT1-204ENST00000503215 TTLL11Q8NHH1 800 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 TRPM4Q8TD43 1214 aa20.84■□□□□ 0.93
SCLT1-204ENST00000503215 VEGFBP49765 207 aa20.83■□□□□ 0.92
SCLT1-204ENST00000503215 UBE3BQ7Z3V4 1068 aa20.83■□□□□ 0.92
SCLT1-204ENST00000503215 GREM2Q9H772 168 aa20.83■□□□□ 0.92
SCLT1-204ENST00000503215 CNOT7Q9UIV1 285 aaKnown RBP20.83■□□□□ 0.92
SCLT1-204ENST00000503215 ECE2O60344 883 aa20.82■□□□□ 0.92
SCLT1-204ENST00000503215 UFL1O94874 794 aa20.82■□□□□ 0.92
SCLT1-204ENST00000503215 FKBP5Q13451 457 aaPredicted RBP20.82■□□□□ 0.92
SCLT1-204ENST00000503215 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
SCLT1-204ENST00000503215 ANKIB1Q9P2G1 1089 aa20.82■□□□□ 0.92
SCLT1-204ENST00000503215 RTL9Q8NET4 1388 aa20.82■□□□□ 0.92
SCLT1-204ENST00000503215 GCKRQ14397 625 aa20.81■□□□□ 0.92
SCLT1-204ENST00000503215 CST9Q5W186 159 aa20.81■□□□□ 0.92
SCLT1-204ENST00000503215 ANKRD18AQ8IVF6 992 aa20.81■□□□□ 0.92
SCLT1-204ENST00000503215 DNAAF4Q8WXU2 420 aa20.81■□□□□ 0.92
SCLT1-204ENST00000503215 F6X3S4 739 aa20.8■□□□□ 0.92
SCLT1-204ENST00000503215 CASP7P55210 303 aa20.8■□□□□ 0.92
SCLT1-204ENST00000503215 MICALL2Q8IY33 904 aa20.8■□□□□ 0.92
SCLT1-204ENST00000503215 EYA3Q99504 573 aa20.8■□□□□ 0.92
SCLT1-204ENST00000503215 GGA1Q9UJY5 639 aa20.8■□□□□ 0.92
SCLT1-204ENST00000503215 EGFRP00533 1210 aa20.79■□□□□ 0.92
SCLT1-204ENST00000503215 SAMD7Q7Z3H4 446 aa20.79■□□□□ 0.92
SCLT1-204ENST00000503215 GLIS2Q9BZE0 524 aaPredicted RBP20.79■□□□□ 0.92
SCLT1-204ENST00000503215 ZC3H12CQ9C0D7 883 aaKnown RBP20.79■□□□□ 0.92
SCLT1-204ENST00000503215 DLK2Q6UY11 383 aa20.78■□□□□ 0.92
SCLT1-204ENST00000503215 PGAP2Q9UHJ9 254 aa20.78■□□□□ 0.92
SCLT1-204ENST00000503215 RASSF10A6NK89 507 aa20.77■□□□□ 0.92
SCLT1-204ENST00000503215 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
SCLT1-204ENST00000503215 MINPP1Q9UNW1 487 aa20.77■□□□□ 0.92
SCLT1-204ENST00000503215 SCN9AQ15858 1988 aa20.77■□□□□ 0.91
SCLT1-204ENST00000503215 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
SCLT1-204ENST00000503215 H7C1D1 291 aa20.76■□□□□ 0.91
SCLT1-204ENST00000503215 DEFB115Q30KQ5 88 aa20.76■□□□□ 0.91
SCLT1-204ENST00000503215 LINS1Q8NG48 757 aa20.76■□□□□ 0.91
SCLT1-204ENST00000503215 DPF2Q92785 391 aa20.76■□□□□ 0.91
SCLT1-204ENST00000503215 CDC5LQ99459 802 aaKnown RBP20.76■□□□□ 0.91
SCLT1-204ENST00000503215 XDHP47989 1333 aa20.75■□□□□ 0.91
SCLT1-204ENST00000503215 FAM161AQ3B820 660 aa20.75■□□□□ 0.91
SCLT1-204ENST00000503215 TBC1D10BQ4KMP7 808 aaPredicted RBP20.75■□□□□ 0.91
SCLT1-204ENST00000503215 RBM26Q5T8P6 1007 aaKnown RBP20.75■□□□□ 0.91
SCLT1-204ENST00000503215 PLA2G12BQ9BX93 195 aa20.75■□□□□ 0.91
SCLT1-204ENST00000503215 MYH16Q9H6N6 1097 aa20.75■□□□□ 0.91
SCLT1-204ENST00000503215 BSDC1Q9NW68 430 aaPredicted RBP20.75■□□□□ 0.91
SCLT1-204ENST00000503215 VIL1P09327 827 aaKnown RBP20.74■□□□□ 0.91
SCLT1-204ENST00000503215 BEND3Q5T5X7 828 aa20.74■□□□□ 0.91
SCLT1-204ENST00000503215 G3V3G9 751 aa20.73■□□□□ 0.91
SCLT1-204ENST00000503215 CSF1RP07333 972 aa20.73■□□□□ 0.91
SCLT1-204ENST00000503215 ITGA6P23229 1130 aa20.73■□□□□ 0.91
SCLT1-204ENST00000503215 ATP2B4P23634 1241 aa20.73■□□□□ 0.91
SCLT1-204ENST00000503215 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
SCLT1-204ENST00000503215 FOXN1O15353 648 aa20.72■□□□□ 0.91
SCLT1-204ENST00000503215 USP48Q86UV5 1035 aa20.72■□□□□ 0.91
SCLT1-204ENST00000503215 ZC3H15Q8WU90 426 aaKnown RBP20.72■□□□□ 0.91
SCLT1-204ENST00000503215 WDR33Q9C0J8 1336 aaKnown RBP20.72■□□□□ 0.91
SCLT1-204ENST00000503215 CELF2O95319 508 aaKnown RBP20.72■□□□□ 0.91
SCLT1-204ENST00000503215 RPS12P25398 132 aaKnown RBP20.72■□□□□ 0.91
SCLT1-204ENST00000503215 TXNRD3Q86VQ6 643 aa20.72■□□□□ 0.91
SCLT1-204ENST00000503215 ASTN2O75129 1339 aaPredicted RBP20.71■□□□□ 0.91
SCLT1-204ENST00000503215 MYH3P11055 1940 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 CACNA1FO60840 1977 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 KLRK1P26718 216 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 FOXO4P98177 505 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 EPHA10Q5JZY3 1008 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 CYP4F22Q6NT55 531 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 ZNF408Q9H9D4 720 aa20.71■□□□□ 0.91
SCLT1-204ENST00000503215 SPEF2Q9C093 1822 aa20.7■□□□□ 0.9
SCLT1-204ENST00000503215 CCT4P50991 539 aaKnown RBP20.7■□□□□ 0.9
SCLT1-204ENST00000503215 GRM1Q13255 1194 aa20.7■□□□□ 0.9
SCLT1-204ENST00000503215 CDC37L1Q7L3B6 337 aa20.7■□□□□ 0.9
SCLT1-204ENST00000503215 MXD3Q9BW11 206 aa20.7■□□□□ 0.9
SCLT1-204ENST00000503215 TLL2Q9Y6L7 1015 aa20.7■□□□□ 0.9
SCLT1-204ENST00000503215 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
SCLT1-204ENST00000503215 SNAP23O00161 211 aa20.69■□□□□ 0.9
SCLT1-204ENST00000503215 IGHMBP2P38935 993 aaKnown RBP20.69■□□□□ 0.9
SCLT1-204ENST00000503215 RSBN1LQ6PCB5 846 aaPredicted RBP20.69■□□□□ 0.9
SCLT1-204ENST00000503215 PAXIP1Q6ZW49 1069 aaPredicted RBP20.69■□□□□ 0.9
SCLT1-204ENST00000503215 CAPNS2Q96L46 248 aa20.69■□□□□ 0.9
SCLT1-204ENST00000503215 GMLQ99445 158 aa20.69■□□□□ 0.9
SCLT1-204ENST00000503215 WBP1LQ9NX94 342 aa20.69■□□□□ 0.9
SCLT1-204ENST00000503215 ADM5C9JUS6 153 aa20.67■□□□□ 0.9
SCLT1-204ENST00000503215 KIF4BQ2VIQ3 1234 aa20.67■□□□□ 0.9
SCLT1-204ENST00000503215 SLC4A10Q6U841 1118 aa20.67■□□□□ 0.9
SCLT1-204ENST00000503215 SAPCD2Q86UD0 394 aa20.67■□□□□ 0.9
SCLT1-204ENST00000503215 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
SCLT1-204ENST00000503215 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 USP17L3A6NCW0 530 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 USP17L4A6NCW7 530 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 ZNF280AP59817 542 aaPredicted RBP20.66■□□□□ 0.9
SCLT1-204ENST00000503215 USP17L1Q7RTZ2 530 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 PODNQ7Z5L7 613 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 TNS4Q8IZW8 715 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 HELBQ8NG08 1087 aaPredicted RBP20.66■□□□□ 0.9
SCLT1-204ENST00000503215 MPHOSPH8Q99549 860 aa20.66■□□□□ 0.9
SCLT1-204ENST00000503215 ANKRD18BA2A2Z9 1011 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 GRM8O00222 908 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 AOC2O75106 756 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms