RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZPR1O75312 459 aa26.57■■□□□ 1.84
PTPN13-205ENST00000502971 XAGE2Q96GT9 111 aa26.57■■□□□ 1.84
PTPN13-205ENST00000502971 BCL2L12Q9HB09 334 aa26.57■■□□□ 1.84
PTPN13-205ENST00000502971 MROH5Q6ZUA9 1318 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 USPL1Q5W0Q7 1092 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 PALD1Q9ULE6 856 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 C4BP0C0L5 1744 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 ABCC12Q96J65 1359 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 IFIT1P09914 478 aaKnown RBP26.56■■□□□ 1.84
PTPN13-205ENST00000502971 SF3B2Q13435 895 aaKnown RBP26.56■■□□□ 1.84
PTPN13-205ENST00000502971 ATP2B3Q16720 1220 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 CCDC125Q86Z20 511 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 PROM2Q8N271 834 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 VGLL2Q8N8G2 317 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 EDC3Q96F86 508 aaKnown RBP26.56■■□□□ 1.84
PTPN13-205ENST00000502971 FAM227BQ96M60 508 aa26.56■■□□□ 1.84
PTPN13-205ENST00000502971 GORABQ5T7V8 394 aa26.55■■□□□ 1.84
PTPN13-205ENST00000502971 KBTBD3Q8NAB2 608 aa26.55■■□□□ 1.84
PTPN13-205ENST00000502971 PAG1Q9NWQ8 432 aa26.55■■□□□ 1.84
PTPN13-205ENST00000502971 SPEF2Q9C093 1822 aa26.55■■□□□ 1.84
PTPN13-205ENST00000502971 TBC1D9BQ66K14 1250 aa26.54■■□□□ 1.84
PTPN13-205ENST00000502971 SPRYD3Q8NCJ5 442 aa26.54■■□□□ 1.84
PTPN13-205ENST00000502971 NYXQ9GZU5 481 aa26.54■■□□□ 1.84
PTPN13-205ENST00000502971 PDE8BO95263 885 aa26.53■■□□□ 1.84
PTPN13-205ENST00000502971 TTC39AQ5SRH9 613 aa26.53■■□□□ 1.84
PTPN13-205ENST00000502971 ARHGEF1Q92888 912 aaKnown RBP26.53■■□□□ 1.84
PTPN13-205ENST00000502971 MED23Q9ULK4 1368 aa26.53■■□□□ 1.84
PTPN13-205ENST00000502971 CCDC171Q6TFL3 1326 aa26.53■■□□□ 1.84
PTPN13-205ENST00000502971 A0A0D9SFI3 127 aa26.53■■□□□ 1.84
PTPN13-205ENST00000502971 SLC10A5Q5PT55 438 aa26.53■■□□□ 1.84
PTPN13-205ENST00000502971 ADORA1P30542 326 aa26.52■■□□□ 1.84
PTPN13-205ENST00000502971 MCM2P49736 904 aa26.52■■□□□ 1.84
PTPN13-205ENST00000502971 NBR1Q14596 966 aa26.52■■□□□ 1.84
PTPN13-205ENST00000502971 ERFEQ4G0M1 354 aa26.52■■□□□ 1.84
PTPN13-205ENST00000502971 DDX46Q7L014 1031 aaKnown RBP26.52■■□□□ 1.84
PTPN13-205ENST00000502971 SETDB2Q96T68 719 aa26.52■■□□□ 1.84
PTPN13-205ENST00000502971 MPHOSPH8Q99549 860 aa26.52■■□□□ 1.84
PTPN13-205ENST00000502971 SRP68Q9UHB9 627 aaKnown RBP26.52■■□□□ 1.84
PTPN13-205ENST00000502971 C4AP0C0L4 1744 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 PTH1RQ03431 593 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 TRAPPC3LQ5T215 181 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 SMIM5Q71RC9 77 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 CHMP5Q9NZZ3 219 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 NDUFB9Q9Y6M9 179 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 GOLIM4O00461 696 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 ADRA2BP18089 450 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 IGHMBP2P38935 993 aaKnown RBP26.51■■□□□ 1.83
PTPN13-205ENST00000502971 NEK4P51957 841 aa26.51■■□□□ 1.83
PTPN13-205ENST00000502971 SF3B3Q15393 1217 aaKnown RBP26.51■■□□□ 1.83
PTPN13-205ENST00000502971 ZNF512BQ96KM6 892 aaPredicted RBP26.51■■□□□ 1.83
PTPN13-205ENST00000502971 COL24A1Q17RW2 1714 aa26.5■■□□□ 1.83
PTPN13-205ENST00000502971 BAG6P46379 1132 aa26.5■■□□□ 1.83
PTPN13-205ENST00000502971 BICDL1Q6ZP65 573 aa26.5■■□□□ 1.83
PTPN13-205ENST00000502971 MAP4K1Q92918 833 aa26.5■■□□□ 1.83
PTPN13-205ENST00000502971 KCNB2Q92953 911 aa26.5■■□□□ 1.83
PTPN13-205ENST00000502971 SEC31BQ9NQW1 1179 aa26.5■■□□□ 1.83
PTPN13-205ENST00000502971 HSP90AA1P07900 732 aaKnown RBP26.49■■□□□ 1.83
PTPN13-205ENST00000502971 PUM3Q15397 648 aaKnown RBP26.49■■□□□ 1.83
PTPN13-205ENST00000502971 CDC5LQ99459 802 aaKnown RBP26.49■■□□□ 1.83
PTPN13-205ENST00000502971 SNX14Q9Y5W7 946 aa26.49■■□□□ 1.83
PTPN13-205ENST00000502971 GTF2E1P29083 439 aaPredicted RBP26.48■■□□□ 1.83
PTPN13-205ENST00000502971 RFC4P35249 363 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 DDIT3P35638 169 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 LPIN2Q92539 896 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 CAMKK2Q96RR4 588 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 SOCS7O14512 581 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 FGFR2P21802 821 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 LRRFIP1Q32MZ4 808 aaKnown RBP26.48■■□□□ 1.83
PTPN13-205ENST00000502971 AMIGO3Q86WK7 504 aa26.48■■□□□ 1.83
PTPN13-205ENST00000502971 CIZ1Q9ULV3 898 aaPredicted RBP26.48■■□□□ 1.83
PTPN13-205ENST00000502971 NECTIN1Q15223 517 aa26.47■■□□□ 1.83
PTPN13-205ENST00000502971 MCMDC2Q4G0Z9 681 aa26.47■■□□□ 1.83
PTPN13-205ENST00000502971 NFKBIBQ15653 356 aa26.46■■□□□ 1.83
PTPN13-205ENST00000502971 HELLSQ9NRZ9 838 aa26.46■■□□□ 1.83
PTPN13-205ENST00000502971 TPTE2Q6XPS3 522 aa26.45■■□□□ 1.83
PTPN13-205ENST00000502971 NBPF5PQ86XG9 351 aaPredicted RBP26.45■■□□□ 1.83
PTPN13-205ENST00000502971 RBM8AQ9Y5S9 174 aaKnown RBP26.45■■□□□ 1.83
PTPN13-205ENST00000502971 UBR3Q6ZT12 1888 aa26.45■■□□□ 1.83
PTPN13-205ENST00000502971 CASZ1Q86V15 1759 aa26.45■■□□□ 1.82
PTPN13-205ENST00000502971 SSFA2P28290 1259 aa26.45■■□□□ 1.82
PTPN13-205ENST00000502971 FKBP4Q02790 459 aaKnown RBP eCLIP26.45■■□□□ 1.82
PTPN13-205ENST00000502971 ZNF589Q86UQ0 364 aaPredicted RBP26.45■■□□□ 1.82
PTPN13-205ENST00000502971 RASEFQ8IZ41 740 aa26.45■■□□□ 1.82
PTPN13-205ENST00000502971 TAF5LO75529 589 aa26.44■■□□□ 1.82
PTPN13-205ENST00000502971 SLC5A1P13866 664 aa26.44■■□□□ 1.82
PTPN13-205ENST00000502971 EN1Q05925 392 aaPredicted RBP26.44■■□□□ 1.82
PTPN13-205ENST00000502971 PRPF40BQ6NWY9 871 aaKnown RBP26.44■■□□□ 1.82
PTPN13-205ENST00000502971 ARAP2Q8WZ64 1704 aa26.44■■□□□ 1.82
PTPN13-205ENST00000502971 RNF113AO15541 343 aaKnown RBP26.43■■□□□ 1.82
PTPN13-205ENST00000502971 PHF14O94880 888 aa26.43■■□□□ 1.82
PTPN13-205ENST00000502971 UQCRFS1P1P0C7P4 283 aa26.43■■□□□ 1.82
PTPN13-205ENST00000502971 ZKSCAN1P17029 563 aaPredicted RBP26.43■■□□□ 1.82
PTPN13-205ENST00000502971 KCNJ4P48050 445 aa26.43■■□□□ 1.82
PTPN13-205ENST00000502971 EZH2Q15910 746 aaKnown RBP26.42■■□□□ 1.82
PTPN13-205ENST00000502971 ZMYM1Q5SVZ6 1142 aa26.42■■□□□ 1.82
PTPN13-205ENST00000502971 RNF20Q5VTR2 975 aa26.42■■□□□ 1.82
PTPN13-205ENST00000502971 ANKRD18AQ8IVF6 992 aa26.42■■□□□ 1.82
PTPN13-205ENST00000502971 TM6SF1Q9BZW5 370 aa26.42■■□□□ 1.82
PTPN13-205ENST00000502971 ZFYP08048 801 aaPredicted RBP26.42■■□□□ 1.82
PTPN13-205ENST00000502971 CREB3L3Q68CJ9 461 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms