RNA–Protein interactions for RNA: ENST00000502379.5

SDHA-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 679 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-202ENST00000502379 ZBTB12Q9Y330 459 aaPredicted RBP28.36■■■□□ 2.13
SDHA-202ENST00000502379 PSMD14O00487 310 aa28.35■■■□□ 2.13
SDHA-202ENST00000502379 FKBP5Q13451 457 aaPredicted RBP28.35■■■□□ 2.13
SDHA-202ENST00000502379 ANKRD18AQ8IVF6 992 aa28.35■■■□□ 2.13
SDHA-202ENST00000502379 CNOT7Q9UIV1 285 aaKnown RBP28.35■■■□□ 2.13
SDHA-202ENST00000502379 TRAF5O00463 557 aa28.34■■■□□ 2.13
SDHA-202ENST00000502379 ECE2O60344 883 aa28.34■■■□□ 2.13
SDHA-202ENST00000502379 UFL1O94874 794 aa28.34■■■□□ 2.13
SDHA-202ENST00000502379 VEGFBP49765 207 aa28.34■■■□□ 2.13
SDHA-202ENST00000502379 HIRAP54198 1017 aaPredicted RBP28.34■■■□□ 2.13
SDHA-202ENST00000502379 GCKRQ14397 625 aa28.34■■■□□ 2.13
SDHA-202ENST00000502379 UBE3BQ7Z3V4 1068 aa28.34■■■□□ 2.13
SDHA-202ENST00000502379 COL13A1Q5TAT6 717 aaPredicted RBP28.33■■■□□ 2.13
SDHA-202ENST00000502379 DNAAF4Q8WXU2 420 aa28.33■■■□□ 2.13
SDHA-202ENST00000502379 ZC3H12CQ9C0D7 883 aaKnown RBP28.33■■■□□ 2.13
SDHA-202ENST00000502379 GREM2Q9H772 168 aa28.33■■■□□ 2.13
SDHA-202ENST00000502379 GGA1Q9UJY5 639 aa28.33■■■□□ 2.13
SDHA-202ENST00000502379 TRPM4Q8TD43 1214 aa28.32■■■□□ 2.12
SDHA-202ENST00000502379 MICALL2Q8IY33 904 aa28.31■■■□□ 2.12
SDHA-202ENST00000502379 PGAP2Q9UHJ9 254 aa28.31■■■□□ 2.12
SDHA-202ENST00000502379 RTL9Q8NET4 1388 aa28.31■■■□□ 2.12
SDHA-202ENST00000502379 CASP7P55210 303 aa28.3■■■□□ 2.12
SDHA-202ENST00000502379 CST9Q5W186 159 aa28.3■■■□□ 2.12
SDHA-202ENST00000502379 DPF2Q92785 391 aa28.3■■■□□ 2.12
SDHA-202ENST00000502379 CDC5LQ99459 802 aaKnown RBP28.3■■■□□ 2.12
SDHA-202ENST00000502379 MYH16Q9H6N6 1097 aa28.3■■■□□ 2.12
SDHA-202ENST00000502379 WTIPA6NIX2 430 aaPredicted RBP28.29■■■□□ 2.12
SDHA-202ENST00000502379 RASSF10A6NK89 507 aa28.29■■■□□ 2.12
SDHA-202ENST00000502379 H7C1D1 291 aa28.29■■■□□ 2.12
SDHA-202ENST00000502379 DEFB115Q30KQ5 88 aa28.29■■■□□ 2.12
SDHA-202ENST00000502379 LINS1Q8NG48 757 aa28.29■■■□□ 2.12
SDHA-202ENST00000502379 ABT1Q9ULW3 272 aaKnown RBP28.29■■■□□ 2.12
SDHA-202ENST00000502379 XDHP47989 1333 aa28.28■■■□□ 2.12
SDHA-202ENST00000502379 GLIS2Q9BZE0 524 aaPredicted RBP28.28■■■□□ 2.12
SDHA-202ENST00000502379 F6X3S4 739 aa28.27■■■□□ 2.12
SDHA-202ENST00000502379 SAMD7Q7Z3H4 446 aa28.27■■■□□ 2.12
SDHA-202ENST00000502379 ZC3H15Q8WU90 426 aaKnown RBP28.27■■■□□ 2.12
SDHA-202ENST00000502379 PLA2G12BQ9BX93 195 aa28.27■■■□□ 2.12
SDHA-202ENST00000502379 BSDC1Q9NW68 430 aaPredicted RBP28.27■■■□□ 2.12
SDHA-202ENST00000502379 MINPP1Q9UNW1 487 aa28.27■■■□□ 2.12
SDHA-202ENST00000502379 G3V3G9 751 aa28.26■■■□□ 2.11
SDHA-202ENST00000502379 ATP2B4P23634 1241 aa28.26■■■□□ 2.11
SDHA-202ENST00000502379 DCAF8Q5TAQ9 597 aa28.26■■■□□ 2.11
SDHA-202ENST00000502379 EGFRP00533 1210 aa28.25■■■□□ 2.11
SDHA-202ENST00000502379 VIL1P09327 827 aaKnown RBP28.25■■■□□ 2.11
SDHA-202ENST00000502379 ZNF521Q96K83 1311 aa28.24■■■□□ 2.11
SDHA-202ENST00000502379 RPS12P25398 132 aaKnown RBP28.24■■■□□ 2.11
SDHA-202ENST00000502379 TBC1D10BQ4KMP7 808 aaPredicted RBP28.24■■■□□ 2.11
SDHA-202ENST00000502379 CACNA1FO60840 1977 aa28.24■■■□□ 2.11
SDHA-202ENST00000502379 SCN9AQ15858 1988 aa28.23■■■□□ 2.11
SDHA-202ENST00000502379 CSF1RP07333 972 aa28.23■■■□□ 2.11
SDHA-202ENST00000502379 BEND3Q5T5X7 828 aa28.23■■■□□ 2.11
SDHA-202ENST00000502379 ITGA6P23229 1130 aa28.22■■■□□ 2.11
SDHA-202ENST00000502379 FAM161AQ3B820 660 aa28.22■■■□□ 2.11
SDHA-202ENST00000502379 RBM26Q5T8P6 1007 aaKnown RBP28.22■■■□□ 2.11
SDHA-202ENST00000502379 MYH3P11055 1940 aa28.22■■■□□ 2.11
SDHA-202ENST00000502379 WDR33Q9C0J8 1336 aaKnown RBP28.21■■■□□ 2.11
SDHA-202ENST00000502379 CELF2O95319 508 aaKnown RBP28.21■■■□□ 2.11
SDHA-202ENST00000502379 CDC37L1Q7L3B6 337 aa28.21■■■□□ 2.11
SDHA-202ENST00000502379 IGHMBP2P38935 993 aaKnown RBP28.2■■■□□ 2.1
SDHA-202ENST00000502379 DLK2Q6UY11 383 aa28.2■■■□□ 2.1
SDHA-202ENST00000502379 USP48Q86UV5 1035 aa28.2■■■□□ 2.1
SDHA-202ENST00000502379 TLL2Q9Y6L7 1015 aa28.2■■■□□ 2.1
SDHA-202ENST00000502379 FOXN1O15353 648 aa28.19■■■□□ 2.1
SDHA-202ENST00000502379 CCT4P50991 539 aaKnown RBP28.19■■■□□ 2.1
SDHA-202ENST00000502379 RSBN1LQ6PCB5 846 aaPredicted RBP28.18■■■□□ 2.1
SDHA-202ENST00000502379 TRPM7Q96QT4 1865 aa28.18■■■□□ 2.1
SDHA-202ENST00000502379 FOXO4P98177 505 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 CYP4F22Q6NT55 531 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 PODNQ7Z5L7 613 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 CAPNS2Q96L46 248 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 ZNF408Q9H9D4 720 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 WBP1LQ9NX94 342 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 SPEF2Q9C093 1822 aa28.17■■■□□ 2.1
SDHA-202ENST00000502379 MED23Q9ULK4 1368 aa28.16■■■□□ 2.1
SDHA-202ENST00000502379 PAXIP1Q6ZW49 1069 aaPredicted RBP28.16■■■□□ 2.1
SDHA-202ENST00000502379 MPHOSPH8Q99549 860 aa28.16■■■□□ 2.1
SDHA-202ENST00000502379 KIF4BQ2VIQ3 1234 aa28.15■■■□□ 2.1
SDHA-202ENST00000502379 SAPCD2Q86UD0 394 aa28.15■■■□□ 2.1
SDHA-202ENST00000502379 TXNRD3Q86VQ6 643 aa28.15■■■□□ 2.1
SDHA-202ENST00000502379 AGBL3Q8NEM8 1001 aa28.15■■■□□ 2.1
SDHA-202ENST00000502379 GMLQ99445 158 aa28.15■■■□□ 2.1
SDHA-202ENST00000502379 ANKRD18BA2A2Z9 1011 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 USP17L3A6NCW0 530 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 USP17L4A6NCW7 530 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 ZNF280AP59817 542 aaPredicted RBP28.14■■■□□ 2.1
SDHA-202ENST00000502379 GRM1Q13255 1194 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 EPHA10Q5JZY3 1008 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 USP17L1Q7RTZ2 530 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 TNS4Q8IZW8 715 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 LEMD3Q9Y2U8 911 aa28.14■■■□□ 2.1
SDHA-202ENST00000502379 KLRK1P26718 216 aa28.13■■■□□ 2.09
SDHA-202ENST00000502379 SLC4A10Q6U841 1118 aa28.13■■■□□ 2.09
SDHA-202ENST00000502379 KRT26Q7Z3Y9 468 aa28.13■■■□□ 2.09
SDHA-202ENST00000502379 AIDAQ96BJ3 306 aa28.13■■■□□ 2.09
SDHA-202ENST00000502379 ANKRD2Q9GZV1 360 aa28.13■■■□□ 2.09
SDHA-202ENST00000502379 ZNF804BA4D1E1 1349 aa28.13■■■□□ 2.09
SDHA-202ENST00000502379 ASTN2O75129 1339 aaPredicted RBP28.13■■■□□ 2.09
SDHA-202ENST00000502379 ECE1P42892 770 aa28.12■■■□□ 2.09
SDHA-202ENST00000502379 ZNF609O15014 1411 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms