RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 MAN1A2O60476 641 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 PRDM16Q9HAZ2 1276 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 CCDC12Q8WUD4 166 aaPredicted RBP5.42□□□□□ -1.54
NEAT1-202ENST00000501122 IQCA1LA6NCM1 817 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 UBE2HP62256 183 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 JMYQ8N9B5 988 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 SH2D4AQ9H788 454 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 ATP2B3Q16720 1220 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 SMARCA5O60264 1052 aaPredicted RBP5.42□□□□□ -1.54
NEAT1-202ENST00000501122 CENPKQ9BS16 269 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 BHMTQ93088 406 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 CPLX1O14810 134 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 PPP1R14BQ96C90 147 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 DDX19BQ9UMR2 479 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 E2F5Q15329 346 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 GPR161Q8N6U8 529 aaKnown RBP5.42□□□□□ -1.54
NEAT1-202ENST00000501122 CAPS2Q9BXY5 557 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 NEK1Q96PY6 1258 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 TAOK1Q7L7X3 1001 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 PHLDB1Q86UU1 1377 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 RRP7AQ9Y3A4 280 aaKnown RBP5.42□□□□□ -1.54
NEAT1-202ENST00000501122 SPATA32Q96LK8 384 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 SMARCC2Q8TAQ2 1214 aa5.42□□□□□ -1.54
NEAT1-202ENST00000501122 TRIM66O15016 1216 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 STIM1Q13586 685 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 CFAP157Q5JU67 520 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 XAB2Q9HCS7 855 aaKnown RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 KRT7P08729 469 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 MX1P20591 662 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 CFAP58Q5T655 872 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 C16orf87Q6PH81 154 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 TMC6Q7Z403 805 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 TRIM42Q8IWZ5 723 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 STXBP3O00186 592 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 PSMC1P62191 440 aaKnown RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 SIX5Q8N196 739 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 B4GALNT2Q8NHY0 566 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 SAFBQ15424 915 aaKnown RBP eCLIP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.41□□□□□ -1.547e-28■■■□□ 18.7
NEAT1-202ENST00000501122 SLC8A3P57103 927 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 H0YC42 278 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 TPD52P55327 224 aaPredicted RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 ME1P48163 572 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 ARHGAP18Q8N392 663 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 TMEM57Q8N5G2 664 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 LRRC45Q96CN5 670 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 ZBTB10Q96DT7 871 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 LONP1P36776 959 aaKnown RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 MATR3P43243 847 aaKnown RBP eCLIP5.41□□□□□ -1.543e-25■■□□□ 12.1
NEAT1-202ENST00000501122 RPGRIP1Q96KN7 1286 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 TUBA8Q9NY65 449 aaPredicted RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 ROCK2O75116 1388 aaKnown RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 ATAD2Q6PL18 1390 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 CCDC15Q0P6D6 951 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 API5Q9BZZ5 524 aaKnown RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 NEK2P51955 445 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 ANKRD13AQ8IZ07 590 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 SMIM23A6NLE4 172 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 EIF3AQ14152 1382 aaKnown RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
NEAT1-202ENST00000501122 FAN1Q9Y2M0 1017 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 POLE3Q9NRF9 147 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 CHMP4BP1P59074 171 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 Q9H521 79 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 RHOXF2BP0C7M4 288 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 VAV2P52735 878 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 RHOXF2Q9BQY4 288 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 DUSP27Q5VZP5 1158 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 PPFIA4O75335 1185 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 SH3BP1Q9Y3L3 701 aa5.41□□□□□ -1.54
NEAT1-202ENST00000501122 KIAA0825Q8IV33 1275 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 CCDC68Q9H2F9 335 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 ARHGEF9O43307 516 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 SCP2P22307 547 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 KIAA0753Q2KHM9 967 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 FAM71BQ8TC56 605 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 BCAS4Q8TDM0 211 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 TACC3Q9Y6A5 838 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 RASSF2P50749 326 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 C8orf34Q49A92 452 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 JAKMIP1Q96N16 626 aaKnown RBP5.4□□□□□ -1.54
NEAT1-202ENST00000501122 PLCB4Q15147 1175 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 FGD4Q96M96 766 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.4□□□□□ -1.54
NEAT1-202ENST00000501122 GFM2Q969S9 779 aaKnown RBP5.4□□□□□ -1.54
NEAT1-202ENST00000501122 C6orf203Q9P0P8 240 aaPredicted RBP5.4□□□□□ -1.54
NEAT1-202ENST00000501122 ZNF445P59923 1031 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 ZFYVE27Q5T4F4 411 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 CTTNBP2NLQ9P2B4 639 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 PPP1R9AQ9ULJ8 1098 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 GYS2P54840 703 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 FLCNQ8NFG4 579 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 NUF2Q9BZD4 464 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 MARCH6O60337 910 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 ECM2O94769 699 aaPredicted RBP5.4□□□□□ -1.54
NEAT1-202ENST00000501122 ARHGEF2Q92974 986 aaKnown RBP5.4□□□□□ -1.54
NEAT1-202ENST00000501122 TEKT1Q969V4 418 aa5.4□□□□□ -1.54
NEAT1-202ENST00000501122 MMP14P50281 582 aa5.4□□□□□ -1.55
NEAT1-202ENST00000501122 CKAP2LQ8IYA6 745 aa5.4□□□□□ -1.55
NEAT1-202ENST00000501122 LZICQ8WZA0 190 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms