RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 GJD4Q96KN9 370 aaPredicted RBP8.78□□□□□ -1
MED28-202ENST00000499786 HMX1Q9NP08 348 aaPredicted RBP8.78□□□□□ -1
MED28-202ENST00000499786 WNK3Q9BYP7 1800 aa8.77□□□□□ -1
MED28-202ENST00000499786 N4BP2Q86UW6 1770 aaPredicted RBP8.77□□□□□ -1.01
MED28-202ENST00000499786 CCT4P50991 539 aaKnown RBP8.77□□□□□ -1.01
MED28-202ENST00000499786 FKBP5Q13451 457 aaPredicted RBP8.77□□□□□ -1.01
MED28-202ENST00000499786 ANKLE1Q8NAG6 615 aa8.77□□□□□ -1.01
MED28-202ENST00000499786 ZCRB1Q8TBF4 217 aaKnown RBP8.77□□□□□ -1.01
MED28-202ENST00000499786 NUDT12Q9BQG2 462 aa8.77□□□□□ -1.01
MED28-202ENST00000499786 TRIM34Q9BYJ4 488 aa8.77□□□□□ -1.01
MED28-202ENST00000499786 SLC52A2Q9HAB3 445 aa8.77□□□□□ -1.01
MED28-202ENST00000499786 LGR6Q9HBX8 967 aa8.77□□□□□ -1.01
MED28-202ENST00000499786 BTG4Q9NY30 223 aa8.77□□□□□ -1.01
MED28-202ENST00000499786 KDM6AO15550 1401 aaPredicted RBP8.77□□□□□ -1.01
MED28-202ENST00000499786 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 CABP4P57796 275 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 EIF4A1P60842 406 aaKnown RBP8.76□□□□□ -1.01
MED28-202ENST00000499786 FLIIQ13045 1269 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 PLA2G2CQ5R387 149 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 PTCRAQ6ISU1 281 aaPredicted RBP8.76□□□□□ -1.01
MED28-202ENST00000499786 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
MED28-202ENST00000499786 TSC1Q92574 1164 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
MED28-202ENST00000499786 NWD2Q9ULI1 1742 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 LAMB4A4D0S4 1761 aa8.76□□□□□ -1.01
MED28-202ENST00000499786 EIF2S2P20042 333 aaKnown RBP8.75□□□□□ -1.01
MED28-202ENST00000499786 GGCXP38435 758 aa8.75□□□□□ -1.01
MED28-202ENST00000499786 KCNH2Q12809 1159 aa8.75□□□□□ -1.01
MED28-202ENST00000499786 INTS3Q68E01 1043 aaKnown RBP8.75□□□□□ -1.01
MED28-202ENST00000499786 SLC4A10Q6U841 1118 aa8.75□□□□□ -1.01
MED28-202ENST00000499786 FCF1Q9Y324 198 aaKnown RBP8.75□□□□□ -1.01
MED28-202ENST00000499786 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 RGS12O14924 1447 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 RGS3P49796 1198 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 HDAC1Q13547 482 aaPredicted RBP8.74□□□□□ -1.01
MED28-202ENST00000499786 EPS8L1Q8TE68 723 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 FMNL2Q96PY5 1086 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 CDCA7Q9BWT1 371 aaPredicted RBP8.74□□□□□ -1.01
MED28-202ENST00000499786 ZBTB40Q9NUA8 1239 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 USP35Q9P2H5 1018 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 DBF4Q9UBU7 674 aaPredicted RBP8.74□□□□□ -1.01
MED28-202ENST00000499786 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
MED28-202ENST00000499786 JCADQ9P266 1359 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 TNS2Q63HR2 1409 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 ERVV-2B6SEH9 535 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 CYP27B1O15528 508 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 GPR37L1O60883 481 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 HMMRO75330 724 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 ADAMTS2O95450 1211 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 DDX58O95786 925 aaKnown RBP8.73□□□□□ -1.01
MED28-202ENST00000499786 GNAI3P08754 354 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 ZNF790Q6PG37 636 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
MED28-202ENST00000499786 LRP6O75581 1613 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 PAPPAQ13219 1627 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 C5P01031 1676 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 IGHDP01880 384 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 NR6A1Q15406 480 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 DDX54Q8TDD1 881 aaKnown RBP8.72□□□□□ -1.01
MED28-202ENST00000499786 GCC1Q96CN9 775 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 HYPKQ9NX55 129 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 CHPF2Q9P2E5 772 aa8.72□□□□□ -1.01
MED28-202ENST00000499786 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
MED28-202ENST00000499786 DISP2A7MBM2 1401 aa8.71□□□□□ -1.01
MED28-202ENST00000499786 ZBTB7BO15156 539 aaPredicted RBP8.71□□□□□ -1.02
MED28-202ENST00000499786 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
MED28-202ENST00000499786 SNRPA1P09661 255 aaKnown RBP8.71□□□□□ -1.02
MED28-202ENST00000499786 NFATC2IPQ8NCF5 419 aa8.71□□□□□ -1.02
MED28-202ENST00000499786 TMOD3Q9NYL9 352 aa8.71□□□□□ -1.02
MED28-202ENST00000499786 HDAC5Q9UQL6 1122 aa8.71□□□□□ -1.02
MED28-202ENST00000499786 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.02
MED28-202ENST00000499786 UBR2Q8IWV8 1755 aa8.71□□□□□ -1.02
MED28-202ENST00000499786 F6X3S4 739 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 KCNQ3O43525 872 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 ANP32AP39687 249 aaKnown RBP8.7□□□□□ -1.02
MED28-202ENST00000499786 SLC39A6Q13433 755 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 LIAT1Q6ZQX7 453 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 G2E3Q7L622 706 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 RPAP2Q8IXW5 612 aaPredicted RBP8.7□□□□□ -1.02
MED28-202ENST00000499786 DNAAF4Q8WXU2 420 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 C1orf115Q9H7X2 142 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 PDZRN3Q9UPQ7 1066 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
MED28-202ENST00000499786 ERBB4Q15303 1308 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 SPATA31A6Q5VVP1 1343 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 HEG1Q9ULI3 1381 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 ATP10DQ9P241 1426 aa8.7□□□□□ -1.02
MED28-202ENST00000499786 TOGARAM1Q9Y4F4 1720 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 EXOC5O00471 708 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 GNAI2P04899 355 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 UBTFL1P0CB47 393 aaPredicted RBP8.69□□□□□ -1.02
MED28-202ENST00000499786 NEXNQ0ZGT2 675 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 MEX3CQ5U5Q3 659 aaKnown RBP8.69□□□□□ -1.02
MED28-202ENST00000499786 CCDC24Q8N4L8 307 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 FBXO41Q8TF61 875 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 UNC93B1Q9H1C4 597 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 DDX21Q9NR30 783 aaKnown RBP eCLIP8.69□□□□□ -1.02
MED28-202ENST00000499786 SLIT2O94813 1529 aa8.69□□□□□ -1.02
MED28-202ENST00000499786 CTHP32929 405 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms