RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 BCL2L13Q9BXK5 485 aa20.52■□□□□ 0.88
NR1H3-227ENST00000498548 GPRC5DQ9NZD1 345 aa20.52■□□□□ 0.88
NR1H3-227ENST00000498548 SHTN1A0MZ66 631 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 CCER2I3L3R5 266 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 SLFN5Q08AF3 891 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 TNIP1Q15025 636 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 CDC5LQ99459 802 aaKnown RBP20.51■□□□□ 0.87
NR1H3-227ENST00000498548 ZC3H12CQ9C0D7 883 aaKnown RBP20.51■□□□□ 0.87
NR1H3-227ENST00000498548 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 GGA1Q9UJY5 639 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 ZBTB12Q9Y330 459 aaPredicted RBP20.51■□□□□ 0.87
NR1H3-227ENST00000498548 PASKQ96RG2 1323 aa20.51■□□□□ 0.87
NR1H3-227ENST00000498548 E9PSI1 815 aa20.5■□□□□ 0.87
NR1H3-227ENST00000498548 ECE2O60344 883 aa20.5■□□□□ 0.87
NR1H3-227ENST00000498548 SLC4A10Q6U841 1118 aa20.5■□□□□ 0.87
NR1H3-227ENST00000498548 PLA2G12BQ9BX93 195 aa20.5■□□□□ 0.87
NR1H3-227ENST00000498548 PSMD14O00487 310 aa20.49■□□□□ 0.87
NR1H3-227ENST00000498548 FMR1Q06787 632 aaKnown RBP eCLIP20.49■□□□□ 0.87
NR1H3-227ENST00000498548 FAM161AQ3B820 660 aa20.49■□□□□ 0.87
NR1H3-227ENST00000498548 MRPL50Q8N5N7 158 aaKnown RBP20.49■□□□□ 0.87
NR1H3-227ENST00000498548 MINPP1Q9UNW1 487 aa20.49■□□□□ 0.87
NR1H3-227ENST00000498548 G3V3G9 751 aa20.48■□□□□ 0.87
NR1H3-227ENST00000498548 CSF1RP07333 972 aa20.48■□□□□ 0.87
NR1H3-227ENST00000498548 ITGA6P23229 1130 aa20.48■□□□□ 0.87
NR1H3-227ENST00000498548 DCAF8Q5TAQ9 597 aa20.48■□□□□ 0.87
NR1H3-227ENST00000498548 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
NR1H3-227ENST00000498548 ADARB2Q9NS39 739 aaKnown RBP20.48■□□□□ 0.87
NR1H3-227ENST00000498548 CNOT7Q9UIV1 285 aaKnown RBP20.48■□□□□ 0.87
NR1H3-227ENST00000498548 CREBZFQ9NS37 354 aa20.47■□□□□ 0.87
NR1H3-227ENST00000498548 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
NR1H3-227ENST00000498548 MKRN1Q9UHC7 482 aaKnown RBP20.47■□□□□ 0.87
NR1H3-227ENST00000498548 XDHP47989 1333 aa20.47■□□□□ 0.87
NR1H3-227ENST00000498548 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
NR1H3-227ENST00000498548 SCN9AQ15858 1988 aa20.46■□□□□ 0.87
NR1H3-227ENST00000498548 ATP2B4P23634 1241 aa20.46■□□□□ 0.87
NR1H3-227ENST00000498548 IGHMBP2P38935 993 aaKnown RBP20.46■□□□□ 0.87
NR1H3-227ENST00000498548 FOXO4P98177 505 aa20.46■□□□□ 0.87
NR1H3-227ENST00000498548 CHMP3Q9Y3E7 222 aa20.46■□□□□ 0.87
NR1H3-227ENST00000498548 HIRAP54198 1017 aaPredicted RBP20.45■□□□□ 0.86
NR1H3-227ENST00000498548 EPHA10Q5JZY3 1008 aa20.45■□□□□ 0.86
NR1H3-227ENST00000498548 TRPM4Q8TD43 1214 aa20.45■□□□□ 0.86
NR1H3-227ENST00000498548 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
NR1H3-227ENST00000498548 TMEM88BA6NKF7 163 aa20.44■□□□□ 0.86
NR1H3-227ENST00000498548 MICALL2Q8IY33 904 aa20.44■□□□□ 0.86
NR1H3-227ENST00000498548 JMYQ8N9B5 988 aa20.44■□□□□ 0.86
NR1H3-227ENST00000498548 SRCIN1Q9C0H9 1055 aa20.44■□□□□ 0.86
NR1H3-227ENST00000498548 C9orf78Q9NZ63 289 aaPredicted RBP20.44■□□□□ 0.86
NR1H3-227ENST00000498548 H7C1D1 291 aa20.43■□□□□ 0.86
NR1H3-227ENST00000498548 GRM8O00222 908 aa20.43■□□□□ 0.86
NR1H3-227ENST00000498548 TRAF5O00463 557 aa20.43■□□□□ 0.86
NR1H3-227ENST00000498548 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
NR1H3-227ENST00000498548 SAMD7Q7Z3H4 446 aa20.43■□□□□ 0.86
NR1H3-227ENST00000498548 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
NR1H3-227ENST00000498548 ANKRD18BA2A2Z9 1011 aa20.42■□□□□ 0.86
NR1H3-227ENST00000498548 ALDH1L1O75891 902 aa20.42■□□□□ 0.86
NR1H3-227ENST00000498548 RBM26Q5T8P6 1007 aaKnown RBP20.42■□□□□ 0.86
NR1H3-227ENST00000498548 LMBR1LQ6UX01 489 aa20.42■□□□□ 0.86
NR1H3-227ENST00000498548 TRMT2AQ8IZ69 625 aaKnown RBP20.42■□□□□ 0.86
NR1H3-227ENST00000498548 MIER1Q8N108 512 aa20.42■□□□□ 0.86
NR1H3-227ENST00000498548 VIL1P09327 827 aaKnown RBP20.41■□□□□ 0.86
NR1H3-227ENST00000498548 TBC1D10BQ4KMP7 808 aaPredicted RBP20.41■□□□□ 0.86
NR1H3-227ENST00000498548 DPF2Q92785 391 aa20.41■□□□□ 0.86
NR1H3-227ENST00000498548 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
NR1H3-227ENST00000498548 EGFRP00533 1210 aa20.4■□□□□ 0.86
NR1H3-227ENST00000498548 IFIT5Q13325 482 aaKnown RBP20.4■□□□□ 0.86
NR1H3-227ENST00000498548 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
NR1H3-227ENST00000498548 TXNRD3Q86VQ6 643 aa20.4■□□□□ 0.86
NR1H3-227ENST00000498548 HELBQ8NG08 1087 aaPredicted RBP20.4■□□□□ 0.86
NR1H3-227ENST00000498548 SUCLG2Q96I99 432 aa20.4■□□□□ 0.86
NR1H3-227ENST00000498548 GLIS2Q9BZE0 524 aaPredicted RBP20.4■□□□□ 0.86
NR1H3-227ENST00000498548 POLR2AP24928 1970 aaKnown RBP20.39■□□□□ 0.86
NR1H3-227ENST00000498548 SNAP23O00161 211 aa20.39■□□□□ 0.85
NR1H3-227ENST00000498548 KLRK1P26718 216 aa20.39■□□□□ 0.85
NR1H3-227ENST00000498548 CHRNDQ07001 517 aa20.39■□□□□ 0.85
NR1H3-227ENST00000498548 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.85
NR1H3-227ENST00000498548 TAF5LO75529 589 aa20.38■□□□□ 0.85
NR1H3-227ENST00000498548 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
NR1H3-227ENST00000498548 DLK2Q6UY11 383 aa20.38■□□□□ 0.85
NR1H3-227ENST00000498548 KAZALD1Q96I82 304 aa20.38■□□□□ 0.85
NR1H3-227ENST00000498548 ANKRD2Q9GZV1 360 aa20.38■□□□□ 0.85
NR1H3-227ENST00000498548 PGAP2Q9UHJ9 254 aa20.38■□□□□ 0.85
NR1H3-227ENST00000498548 LEMD3Q9Y2U8 911 aa20.38■□□□□ 0.85
NR1H3-227ENST00000498548 CNTNAP1P78357 1384 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 MED23Q9ULK4 1368 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 PSME4Q14997 1843 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 ZNF804BA4D1E1 1349 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 RPS12P25398 132 aaKnown RBP20.37■□□□□ 0.85
NR1H3-227ENST00000498548 CCDC57Q2TAC2 916 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 CST9Q5W186 159 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 RSBN1LQ6PCB5 846 aaPredicted RBP20.37■□□□□ 0.85
NR1H3-227ENST00000498548 FBXW7Q969H0 707 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
NR1H3-227ENST00000498548 ABT1Q9ULW3 272 aaKnown RBP20.37■□□□□ 0.85
NR1H3-227ENST00000498548 PTPRCP08575 1304 aa20.36■□□□□ 0.85
NR1H3-227ENST00000498548 PLIN1O60240 522 aa20.36■□□□□ 0.85
NR1H3-227ENST00000498548 VEGFBP49765 207 aa20.36■□□□□ 0.85
NR1H3-227ENST00000498548 ALDH1L2Q3SY69 923 aa20.36■□□□□ 0.85
NR1H3-227ENST00000498548 TAF7LQ5H9L4 462 aa20.36■□□□□ 0.85
NR1H3-227ENST00000498548 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms