RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 KCNQ5Q9NR82 932 aa15.69■□□□□ 0.1
THBS3-209ENST00000498500 SCN9AQ15858 1988 aa15.68■□□□□ 0.1
THBS3-209ENST00000498500 SLC10A3P09131 477 aa15.68■□□□□ 0.1
THBS3-209ENST00000498500 RIPK4P57078 832 aa15.68■□□□□ 0.1
THBS3-209ENST00000498500 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
THBS3-209ENST00000498500 CTU1Q7Z7A3 348 aaKnown RBP15.68■□□□□ 0.1
THBS3-209ENST00000498500 EYA3Q99504 573 aa15.68■□□□□ 0.1
THBS3-209ENST00000498500 POLLQ9UGP5 575 aa15.68■□□□□ 0.1
THBS3-209ENST00000498500 GPSM2P81274 684 aa15.67■□□□□ 0.1
THBS3-209ENST00000498500 BABAM1Q9NWV8 329 aa15.67■□□□□ 0.1
THBS3-209ENST00000498500 GGA3Q9NZ52 723 aa15.67■□□□□ 0.1
THBS3-209ENST00000498500 RTL9Q8NET4 1388 aa15.66■□□□□ 0.1
THBS3-209ENST00000498500 G3V3G9 751 aa15.66■□□□□ 0.1
THBS3-209ENST00000498500 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
THBS3-209ENST00000498500 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
THBS3-209ENST00000498500 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
THBS3-209ENST00000498500 ZC3H12CQ9C0D7 883 aaKnown RBP15.66■□□□□ 0.1
THBS3-209ENST00000498500 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
THBS3-209ENST00000498500 LMOD3Q0VAK6 560 aa15.65■□□□□ 0.1
THBS3-209ENST00000498500 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
THBS3-209ENST00000498500 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
THBS3-209ENST00000498500 PRPF38BQ5VTL8 546 aaKnown RBP15.65■□□□□ 0.1
THBS3-209ENST00000498500 CDCA5Q96FF9 252 aa15.65■□□□□ 0.1
THBS3-209ENST00000498500 ASTN2O75129 1339 aaPredicted RBP15.65■□□□□ 0.1
THBS3-209ENST00000498500 VIL1P09327 827 aaKnown RBP15.64■□□□□ 0.09
THBS3-209ENST00000498500 TBC1D16Q8TBP0 767 aa15.64■□□□□ 0.09
THBS3-209ENST00000498500 HDAC9Q9UKV0 1011 aa15.64■□□□□ 0.09
THBS3-209ENST00000498500 PSME4Q14997 1843 aa15.64■□□□□ 0.09
THBS3-209ENST00000498500 COL4A1P02462 1669 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 ATP5J2-PTCD1G3V325 749 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 ANP32CO43423 234 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
THBS3-209ENST00000498500 SCARF1Q14162 830 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 ANGEL2Q5VTE6 544 aaKnown RBP15.63■□□□□ 0.09
THBS3-209ENST00000498500 ANKRD13DQ6ZTN6 518 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 RASAL3Q86YV0 1011 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 PLBD2Q8NHP8 589 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 HPS5Q9UPZ3 1129 aa15.63■□□□□ 0.09
THBS3-209ENST00000498500 PAPPA2Q9BXP8 1791 aa15.62■□□□□ 0.09
THBS3-209ENST00000498500 NEUROD2Q15784 382 aa15.62■□□□□ 0.09
THBS3-209ENST00000498500 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
THBS3-209ENST00000498500 ANKIB1Q9P2G1 1089 aa15.62■□□□□ 0.09
THBS3-209ENST00000498500 IRS4O14654 1257 aaPredicted RBP15.61■□□□□ 0.09
THBS3-209ENST00000498500 UFL1O94874 794 aa15.61■□□□□ 0.09
THBS3-209ENST00000498500 FKBP1BP68106 108 aa15.61■□□□□ 0.09
THBS3-209ENST00000498500 PKN2Q16513 984 aaKnown RBP15.61■□□□□ 0.09
THBS3-209ENST00000498500 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
THBS3-209ENST00000498500 LAS1LQ9Y4W2 734 aaKnown RBP15.61■□□□□ 0.09
THBS3-209ENST00000498500 APAF1O14727 1248 aa15.6■□□□□ 0.09
THBS3-209ENST00000498500 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
THBS3-209ENST00000498500 RSBN1LQ6PCB5 846 aaPredicted RBP15.6■□□□□ 0.09
THBS3-209ENST00000498500 AGBL3Q8NEM8 1001 aa15.6■□□□□ 0.09
THBS3-209ENST00000498500 MRS2Q9HD23 443 aa15.6■□□□□ 0.09
THBS3-209ENST00000498500 GGA1Q9UJY5 639 aa15.6■□□□□ 0.09
THBS3-209ENST00000498500 TBC1D8O95759 1140 aa15.59■□□□□ 0.09
THBS3-209ENST00000498500 ZNF280AP59817 542 aaPredicted RBP15.59■□□□□ 0.09
THBS3-209ENST00000498500 ZNF296Q8WUU4 475 aaPredicted RBP15.59■□□□□ 0.09
THBS3-209ENST00000498500 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
THBS3-209ENST00000498500 DBF4Q9UBU7 674 aaPredicted RBP15.59■□□□□ 0.09
THBS3-209ENST00000498500 CHL1O00533 1208 aa15.58■□□□□ 0.08
THBS3-209ENST00000498500 USP17L8P0C7I0 530 aa15.58■□□□□ 0.08
THBS3-209ENST00000498500 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.08
THBS3-209ENST00000498500 MOB2Q70IA6 237 aa15.58■□□□□ 0.08
THBS3-209ENST00000498500 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
THBS3-209ENST00000498500 SEC31BQ9NQW1 1179 aa15.58■□□□□ 0.08
THBS3-209ENST00000498500 SCAF8Q9UPN6 1271 aaKnown RBP15.58■□□□□ 0.08
THBS3-209ENST00000498500 UBE2Q2LH0YL09 131 aa15.57■□□□□ 0.08
THBS3-209ENST00000498500 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
THBS3-209ENST00000498500 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
THBS3-209ENST00000498500 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
THBS3-209ENST00000498500 ZNF609O15014 1411 aa15.56■□□□□ 0.08
THBS3-209ENST00000498500 USP17L3A6NCW0 530 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 USP17L4A6NCW7 530 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 GPR25O00155 361 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 HOXB7P09629 217 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 ZNF853P0CG23 659 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
THBS3-209ENST00000498500 TRIM28Q13263 835 aaKnown RBP15.55■□□□□ 0.08
THBS3-209ENST00000498500 PRAMEF18Q5VWM3 479 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 USP17L1Q7RTZ2 530 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
THBS3-209ENST00000498500 ZBTB38Q8NAP3 1195 aaPredicted RBP15.55■□□□□ 0.08
THBS3-209ENST00000498500 NF2P35240 595 aa15.54■□□□□ 0.08
THBS3-209ENST00000498500 TM4SF4P48230 202 aa15.54■□□□□ 0.08
THBS3-209ENST00000498500 CCDC152Q4G0S7 254 aa15.54■□□□□ 0.08
THBS3-209ENST00000498500 FBXO46Q6PJ61 603 aaPredicted RBP15.54■□□□□ 0.08
THBS3-209ENST00000498500 PODNQ7Z5L7 613 aa15.54■□□□□ 0.08
THBS3-209ENST00000498500 CCDC85AQ96PX6 553 aaPredicted RBP15.54■□□□□ 0.08
THBS3-209ENST00000498500 GMLQ99445 158 aa15.54■□□□□ 0.08
THBS3-209ENST00000498500 SPEF2Q9C093 1822 aa15.54■□□□□ 0.08
THBS3-209ENST00000498500 XDHP47989 1333 aa15.53■□□□□ 0.08
THBS3-209ENST00000498500 GOLGA2Q08379 1002 aa15.53■□□□□ 0.08
THBS3-209ENST00000498500 NBPF9Q3BBW0 867 aa15.53■□□□□ 0.08
THBS3-209ENST00000498500 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
THBS3-209ENST00000498500 PDE8AO60658 829 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 FKTNO75072 461 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 ATP2B4P23634 1241 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 SREBF2Q12772 1141 aa15.52■□□□□ 0.08
THBS3-209ENST00000498500 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms