RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, human

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-222	ENST00000498268	ADAMTSL4	Q6UY14	1074 aa		8.01	□□□□□ -1.13
USP34-222	ENST00000498268	TRIM33	Q9UPN9	1127 aa		8.01	□□□□□ -1.13
USP34-222	ENST00000498268	ARTN	Q5T4W7	220 aa		8	□□□□□ -1.13
USP34-222	ENST00000498268	NLRP13	Q86W25	1043 aa		8	□□□□□ -1.13
USP34-222	ENST00000498268	COL26A1	Q96A83	441 aa		8	□□□□□ -1.13
USP34-222	ENST00000498268	UBAP1L	F5GYI3	381 aa		7.99	□□□□□ -1.13
USP34-222	ENST00000498268	HOXD8	P13378	290 aa	Predicted RBP	7.99	□□□□□ -1.13
USP34-222	ENST00000498268	SOX18	P35713	384 aa		7.99	□□□□□ -1.13
USP34-222	ENST00000498268	SETDB1	Q15047	1291 aa		7.99	□□□□□ -1.13
USP34-222	ENST00000498268	GHRH	P01286	108 aa		7.98	□□□□□ -1.13
USP34-222	ENST00000498268	ARID4A	P29374	1257 aa	Predicted RBP	7.98	□□□□□ -1.13
USP34-222	ENST00000498268	ZAP70	P43403	619 aa		7.98	□□□□□ -1.13
USP34-222	ENST00000498268	OR13H1	Q8NG92	308 aa		7.98	□□□□□ -1.13
USP34-222	ENST00000498268	GPR152	Q8TDT2	470 aa		7.98	□□□□□ -1.13
USP34-222	ENST00000498268	SEPT3	Q9UH03	358 aa		7.98	□□□□□ -1.13
USP34-222	ENST00000498268	CYP2E1	P05181	493 aa	Predicted RBP	7.97	□□□□□ -1.13
USP34-222	ENST00000498268	SCNN1A	P37088	669 aa		7.97	□□□□□ -1.13
USP34-222	ENST00000498268	ATP11A	P98196	1134 aa		7.97	□□□□□ -1.13
USP34-222	ENST00000498268	CLP1	Q92989	425 aa	Known RBP	7.97	□□□□□ -1.13
USP34-222	ENST00000498268	ZMYND15	Q9H091	742 aa		7.97	□□□□□ -1.13
USP34-222	ENST00000498268	ZFP64	Q9NPA5	681 aa		7.97	□□□□□ -1.13
USP34-222	ENST00000498268	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.97	□□□□□ -1.13
USP34-222	ENST00000498268	GALNT11	Q8NCW6	608 aa		7.96	□□□□□ -1.14
USP34-222	ENST00000498268	PIK3R5	Q8WYR1	880 aa		7.96	□□□□□ -1.14
USP34-222	ENST00000498268	STIM2	Q9P246	746 aa		7.96	□□□□□ -1.14
USP34-222	ENST00000498268		F8W735	103 aa	Predicted RBP	7.95	□□□□□ -1.14
USP34-222	ENST00000498268	HYAL3	O43820	417 aa	Predicted RBP	7.95	□□□□□ -1.14
USP34-222	ENST00000498268	ATCAY	Q86WG3	371 aa		7.95	□□□□□ -1.14
USP34-222	ENST00000498268	DZIP1L	Q8IYY4	767 aa	Known RBP	7.95	□□□□□ -1.14
USP34-222	ENST00000498268	AKTIP	Q9H8T0	292 aa		7.95	□□□□□ -1.14
USP34-222	ENST00000498268	LINC01387	J3KSC0	135 aa		7.94	□□□□□ -1.14
USP34-222	ENST00000498268	TM4SF5	O14894	197 aa		7.94	□□□□□ -1.14
USP34-222	ENST00000498268	TXNDC11	Q6PKC3	985 aa		7.94	□□□□□ -1.14
USP34-222	ENST00000498268	AGGF1	Q8N302	714 aa	eCLIP	7.94	□□□□□ -1.14
USP34-222	ENST00000498268	TMEM130	Q8N3G9	435 aa		7.94	□□□□□ -1.14
USP34-222	ENST00000498268	PSMG3-AS1	Q96PY0	264 aa		7.94	□□□□□ -1.14
USP34-222	ENST00000498268	ARID3C	A6NKF2	412 aa		7.93	□□□□□ -1.14
USP34-222	ENST00000498268	PTCD1	O75127	700 aa	Known RBP	7.93	□□□□□ -1.14
USP34-222	ENST00000498268	PRR23C	Q6ZRP0	262 aa		7.93	□□□□□ -1.14
USP34-222	ENST00000498268	LACRT	Q9GZZ8	138 aa		7.93	□□□□□ -1.14
USP34-222	ENST00000498268	RBSN	Q9H1K0	784 aa		7.93	□□□□□ -1.14
USP34-222	ENST00000498268	RASSF4	Q9H2L5	321 aa		7.93	□□□□□ -1.14
USP34-222	ENST00000498268	KCNK4	Q9NYG8	393 aa		7.93	□□□□□ -1.14
USP34-222	ENST00000498268	WISP1	O95388	367 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	CDC25B	P30305	580 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.92	□□□□□ -1.14
USP34-222	ENST00000498268	CEP135	Q66GS9	1140 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	PBXIP1	Q96AQ6	731 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	MRPL18	Q9H0U6	180 aa	Known RBP	7.92	□□□□□ -1.14
USP34-222	ENST00000498268	TMEM63C	Q9P1W3	806 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	CNTN3	Q9P232	1028 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	PPME1	Q9Y570	386 aa		7.92	□□□□□ -1.14
USP34-222	ENST00000498268	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.91	□□□□□ -1.14
USP34-222	ENST00000498268	ATP2B4	P23634	1241 aa		7.91	□□□□□ -1.14
USP34-222	ENST00000498268	HYAL2	Q12891	473 aa		7.91	□□□□□ -1.14
USP34-222	ENST00000498268	NUDT16	Q96DE0	195 aa	Known RBP	7.91	□□□□□ -1.14
USP34-222	ENST00000498268	UBL7	Q96S82	380 aa	Predicted RBP	7.91	□□□□□ -1.14
USP34-222	ENST00000498268	KRTAP9-2	Q9BYQ4	174 aa		7.91	□□□□□ -1.14
USP34-222	ENST00000498268	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.91	□□□□□ -1.14
USP34-222	ENST00000498268	KIF4A	O95239	1232 aa		7.9	□□□□□ -1.14
USP34-222	ENST00000498268	LRP8	Q14114	963 aa		7.9	□□□□□ -1.14
USP34-222	ENST00000498268	CEP120	Q8N960	986 aa		7.9	□□□□□ -1.14
USP34-222	ENST00000498268	ABI2	Q9NYB9	513 aa	Predicted RBP	7.9	□□□□□ -1.14
USP34-222	ENST00000498268	FAM13B	Q9NYF5	915 aa		7.9	□□□□□ -1.14
USP34-222	ENST00000498268	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.9	□□□□□ -1.14
USP34-222	ENST00000498268	ACPP	P15309	386 aa		7.89	□□□□□ -1.15
USP34-222	ENST00000498268		Q6ZS46	218 aa		7.89	□□□□□ -1.15
USP34-222	ENST00000498268	POP1	Q99575	1024 aa	Known RBP	7.89	□□□□□ -1.15
USP34-222	ENST00000498268	CARD10	Q9BWT7	1032 aa		7.89	□□□□□ -1.15
USP34-222	ENST00000498268	GGNBP2	Q9H3C7	697 aa		7.89	□□□□□ -1.15
USP34-222	ENST00000498268	ELP3	Q9H9T3	547 aa		7.89	□□□□□ -1.15
USP34-222	ENST00000498268		A6NHS1	94 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	DDX3Y	O15523	660 aa	Known RBP	7.88	□□□□□ -1.15
USP34-222	ENST00000498268	TRPA1	O75762	1119 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	EPHA1	P21709	976 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	CDC27	P30260	824 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.88	□□□□□ -1.15
USP34-222	ENST00000498268	SPACA7	Q96KW9	195 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	PBX4	Q9BYU1	374 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	KANSL3	Q9P2N6	904 aa		7.88	□□□□□ -1.15
USP34-222	ENST00000498268	GLB1	P16278	677 aa		7.87	□□□□□ -1.15
USP34-222	ENST00000498268	MAP4K3	Q8IVH8	894 aa		7.87	□□□□□ -1.15
USP34-222	ENST00000498268	ABTB2	Q8N961	1025 aa		7.87	□□□□□ -1.15
USP34-222	ENST00000498268	C1orf127	Q8N9H9	656 aa		7.87	□□□□□ -1.15
USP34-222	ENST00000498268	CCDC97	Q96F63	343 aa	Predicted RBP	7.87	□□□□□ -1.15
USP34-222	ENST00000498268	SRA1	Q9HD15	236 aa	Known RBP	7.87	□□□□□ -1.15
USP34-222	ENST00000498268	RNF112	Q9ULX5	631 aa		7.87	□□□□□ -1.15
USP34-222	ENST00000498268	KRTAP9-6	A0A140TA67	174 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.86	□□□□□ -1.15
USP34-222	ENST00000498268	FST	P19883	344 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	CD68	P34810	354 aa	Predicted RBP	7.86	□□□□□ -1.15
USP34-222	ENST00000498268	NBPF11	Q86T75	865 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	CACTIN-AS1	Q8N1I8	211 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	EDEM1	Q92611	657 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	KLHDC7B	Q96G42	594 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	MUC3B	Q9H195	1237 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	SALL4	Q9UJQ4	1053 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	SERPINA10	Q9UK55	444 aa		7.86	□□□□□ -1.15
USP34-222	ENST00000498268	NFKBIE	O00221	500 aa		7.85	□□□□□ -1.15
USP34-222	ENST00000498268	FSCN2	O14926	492 aa		7.85	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms