RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 ZC3H12CQ9C0D7 883 aaKnown RBP16.62■□□□□ 0.25
TRIM27-207ENST00000498117 PNNQ9H307 717 aaKnown RBP16.62■□□□□ 0.25
TRIM27-207ENST00000498117 LAMB2P55268 1798 aa16.61■□□□□ 0.25
TRIM27-207ENST00000498117 G3V3G9 751 aa16.61■□□□□ 0.25
TRIM27-207ENST00000498117 SCARF1Q14162 830 aa16.61■□□□□ 0.25
TRIM27-207ENST00000498117 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
TRIM27-207ENST00000498117 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
TRIM27-207ENST00000498117 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
TRIM27-207ENST00000498117 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
TRIM27-207ENST00000498117 ZNF280AP59817 542 aaPredicted RBP16.6■□□□□ 0.25
TRIM27-207ENST00000498117 NOM1Q5C9Z4 860 aaKnown RBP16.6■□□□□ 0.25
TRIM27-207ENST00000498117 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
TRIM27-207ENST00000498117 TBC1D16Q8TBP0 767 aa16.6■□□□□ 0.25
TRIM27-207ENST00000498117 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
TRIM27-207ENST00000498117 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
TRIM27-207ENST00000498117 TAF1P21675 1872 aa16.59■□□□□ 0.25
TRIM27-207ENST00000498117 GPR25O00155 361 aa16.59■□□□□ 0.25
TRIM27-207ENST00000498117 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
TRIM27-207ENST00000498117 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
TRIM27-207ENST00000498117 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
TRIM27-207ENST00000498117 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
TRIM27-207ENST00000498117 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
TRIM27-207ENST00000498117 TM4SF4P48230 202 aa16.58■□□□□ 0.24
TRIM27-207ENST00000498117 FAM89AQ96GI7 184 aa16.58■□□□□ 0.24
TRIM27-207ENST00000498117 PITPNM2Q9BZ72 1349 aa16.58■□□□□ 0.24
TRIM27-207ENST00000498117 RSBN1LQ6PCB5 846 aaPredicted RBP16.57■□□□□ 0.24
TRIM27-207ENST00000498117 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
TRIM27-207ENST00000498117 PODXL2Q9NZ53 605 aa16.57■□□□□ 0.24
TRIM27-207ENST00000498117 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
TRIM27-207ENST00000498117 USP17L8P0C7I0 530 aa16.56■□□□□ 0.24
TRIM27-207ENST00000498117 HABP4Q5JVS0 413 aaKnown RBP16.56■□□□□ 0.24
TRIM27-207ENST00000498117 MOB2Q70IA6 237 aa16.56■□□□□ 0.24
TRIM27-207ENST00000498117 PLBD2Q8NHP8 589 aa16.56■□□□□ 0.24
TRIM27-207ENST00000498117 ISCA1Q9BUE6 129 aa16.56■□□□□ 0.24
TRIM27-207ENST00000498117 FKTNO75072 461 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 UFL1O94874 794 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 MYOZ2Q9NPC6 264 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 GGA1Q9UJY5 639 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
TRIM27-207ENST00000498117 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-207ENST00000498117 RIPK4P57078 832 aa16.54■□□□□ 0.24
TRIM27-207ENST00000498117 SREBF2Q12772 1141 aa16.54■□□□□ 0.24
TRIM27-207ENST00000498117 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
TRIM27-207ENST00000498117 ZNF609O15014 1411 aa16.53■□□□□ 0.24
TRIM27-207ENST00000498117 ATP5J2-PTCD1G3V325 749 aa16.53■□□□□ 0.24
TRIM27-207ENST00000498117 HSP90B1P14625 803 aaKnown RBP16.53■□□□□ 0.24
TRIM27-207ENST00000498117 NF2P35240 595 aa16.53■□□□□ 0.24
TRIM27-207ENST00000498117 GMLQ99445 158 aa16.53■□□□□ 0.24
TRIM27-207ENST00000498117 CFHR5Q9BXR6 569 aa16.53■□□□□ 0.24
TRIM27-207ENST00000498117 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
TRIM27-207ENST00000498117 SCN9AQ15858 1988 aa16.52■□□□□ 0.24
TRIM27-207ENST00000498117 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
TRIM27-207ENST00000498117 TRIM28Q13263 835 aaKnown RBP16.52■□□□□ 0.24
TRIM27-207ENST00000498117 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
TRIM27-207ENST00000498117 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
TRIM27-207ENST00000498117 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
TRIM27-207ENST00000498117 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
TRIM27-207ENST00000498117 PRAMEF18Q5VWM3 479 aa16.51■□□□□ 0.23
TRIM27-207ENST00000498117 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
TRIM27-207ENST00000498117 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
TRIM27-207ENST00000498117 PODNQ7Z5L7 613 aa16.51■□□□□ 0.23
TRIM27-207ENST00000498117 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
TRIM27-207ENST00000498117 ALDH1A1P00352 501 aa16.5■□□□□ 0.23
TRIM27-207ENST00000498117 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
TRIM27-207ENST00000498117 SEC31BQ9NQW1 1179 aa16.5■□□□□ 0.23
TRIM27-207ENST00000498117 NBPF9Q3BBW0 867 aa16.49■□□□□ 0.23
TRIM27-207ENST00000498117 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
TRIM27-207ENST00000498117 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
TRIM27-207ENST00000498117 OGFOD1Q8N543 542 aa16.49■□□□□ 0.23
TRIM27-207ENST00000498117 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
TRIM27-207ENST00000498117 DBF4Q9UBU7 674 aaPredicted RBP16.49■□□□□ 0.23
TRIM27-207ENST00000498117 CHL1O00533 1208 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 ATP2B4P23634 1241 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
TRIM27-207ENST00000498117 KRT24Q2M2I5 525 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 CCDC152Q4G0S7 254 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 R3HDMLQ9H3Y0 253 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 HYPKQ9NX55 129 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 TRIM17Q9Y577 477 aa16.48■□□□□ 0.23
TRIM27-207ENST00000498117 XDHP47989 1333 aa16.47■□□□□ 0.23
TRIM27-207ENST00000498117 COL4A1P02462 1669 aa16.47■□□□□ 0.23
TRIM27-207ENST00000498117 HOXB7P09629 217 aa16.47■□□□□ 0.23
TRIM27-207ENST00000498117 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
TRIM27-207ENST00000498117 MMP14P50281 582 aa16.47■□□□□ 0.23
TRIM27-207ENST00000498117 INHBEP58166 350 aa16.47■□□□□ 0.23
TRIM27-207ENST00000498117 POTEFA5A3E0 1075 aa16.46■□□□□ 0.23
TRIM27-207ENST00000498117 WNT10BO00744 389 aa16.46■□□□□ 0.23
TRIM27-207ENST00000498117 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
TRIM27-207ENST00000498117 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
TRIM27-207ENST00000498117 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
TRIM27-207ENST00000498117 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
TRIM27-207ENST00000498117 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
TRIM27-207ENST00000498117 MYO3BQ8WXR4 1341 aa16.45■□□□□ 0.22
TRIM27-207ENST00000498117 KIAA0100Q14667 2235 aaKnown RBP16.44■□□□□ 0.22
TRIM27-207ENST00000498117 MANSC4A6NHS7 340 aaPredicted RBP16.44■□□□□ 0.22
TRIM27-207ENST00000498117 PDE8AO60658 829 aa16.44■□□□□ 0.22
TRIM27-207ENST00000498117 PRKG1Q13976 671 aa16.44■□□□□ 0.22
TRIM27-207ENST00000498117 LDLRAD1Q5T700 205 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms