RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 PCNTO95613 3336 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 ANKRD18BA2A2Z9 1011 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
TCTN3-206ENST00000497399 EYA2O00167 538 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 APBB1O00213 710 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 NPHP1O15259 732 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
TCTN3-206ENST00000497399 RAB11FIP3O75154 756 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 PDE4AP27815 886 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 HTRA3P83110 453 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
TCTN3-206ENST00000497399 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 SIL1Q9H173 461 aa12.16□□□□□ -0.46
TCTN3-206ENST00000497399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.16□□□□□ -0.46
TCTN3-206ENST00000497399 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.46
TCTN3-206ENST00000497399 CRY2Q49AN0 593 aa12.15□□□□□ -0.46
TCTN3-206ENST00000497399 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
TCTN3-206ENST00000497399 HSP90AB4PQ58FF6 505 aa12.15□□□□□ -0.46
TCTN3-206ENST00000497399 BRIP1Q9BX63 1249 aa12.15□□□□□ -0.46
TCTN3-206ENST00000497399 LNPKQ9C0E8 428 aa12.15□□□□□ -0.46
TCTN3-206ENST00000497399 POTECB2RU33 542 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 CIAO1O76071 339 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 APLP1P51693 650 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 RASSF7Q02833 373 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 OS9Q13438 667 aaPredicted RBP12.14□□□□□ -0.47
TCTN3-206ENST00000497399 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
TCTN3-206ENST00000497399 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
TCTN3-206ENST00000497399 KIF1BPQ96EK5 621 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
TCTN3-206ENST00000497399 HOXA10P31260 410 aaPredicted RBP12.13□□□□□ -0.47
TCTN3-206ENST00000497399 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
TCTN3-206ENST00000497399 TAF7LQ5H9L4 462 aa12.13□□□□□ -0.47
TCTN3-206ENST00000497399 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
TCTN3-206ENST00000497399 C16orf71Q8IYS4 520 aaPredicted RBP12.13□□□□□ -0.47
TCTN3-206ENST00000497399 IL1RAPL2Q9NP60 686 aa12.13□□□□□ -0.47
TCTN3-206ENST00000497399 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
TCTN3-206ENST00000497399 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
TCTN3-206ENST00000497399 SALL3Q9BXA9 1300 aa12.12□□□□□ -0.47
TCTN3-206ENST00000497399 NFKBIEO00221 500 aa12.12□□□□□ -0.47
TCTN3-206ENST00000497399 TFCP2Q12800 502 aa12.12□□□□□ -0.47
TCTN3-206ENST00000497399 LDHAL6AQ6ZMR3 332 aa12.12□□□□□ -0.47
TCTN3-206ENST00000497399 DDX46Q7L014 1031 aaKnown RBP12.12□□□□□ -0.47
TCTN3-206ENST00000497399 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
TCTN3-206ENST00000497399 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
TCTN3-206ENST00000497399 CDC5LQ99459 802 aaKnown RBP12.12□□□□□ -0.47
TCTN3-206ENST00000497399 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
TCTN3-206ENST00000497399 PDE6BP35913 854 aa12.11□□□□□ -0.47
TCTN3-206ENST00000497399 IGHMBP2P38935 993 aaKnown RBP12.11□□□□□ -0.47
TCTN3-206ENST00000497399 RGS3P49796 1198 aa12.11□□□□□ -0.47
TCTN3-206ENST00000497399 RPS8P62241 208 aaKnown RBP12.11□□□□□ -0.47
TCTN3-206ENST00000497399 ANKRD18AQ8IVF6 992 aa12.11□□□□□ -0.47
TCTN3-206ENST00000497399 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
TCTN3-206ENST00000497399 CNNM1Q9NRU3 951 aa12.11□□□□□ -0.47
TCTN3-206ENST00000497399 ARAP2Q8WZ64 1704 aa12.11□□□□□ -0.47
TCTN3-206ENST00000497399 SRGNP10124 158 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 FSTL1Q12841 308 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 GRAPQ13588 217 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 PLEKHM2Q8IWE5 1019 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 VGLL2Q8N8G2 317 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
TCTN3-206ENST00000497399 RPGRQ92834 1020 aaKnown RBP12.1□□□□□ -0.47
TCTN3-206ENST00000497399 CRAMP1Q96RY5 1269 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 MPHOSPH8Q99549 860 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 GPR108Q9NPR9 543 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 BSDC1Q9NW68 430 aaPredicted RBP12.1□□□□□ -0.47
TCTN3-206ENST00000497399 ZNF609O15014 1411 aa12.1□□□□□ -0.47
TCTN3-206ENST00000497399 NPR1P16066 1061 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 CLASRPQ8N2M8 674 aaKnown RBP12.09□□□□□ -0.47
TCTN3-206ENST00000497399 KLRG1Q96E93 195 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
TCTN3-206ENST00000497399 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
TCTN3-206ENST00000497399 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
TCTN3-206ENST00000497399 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 CHRNDQ07001 517 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 HELBQ8NG08 1087 aaPredicted RBP12.08□□□□□ -0.48
TCTN3-206ENST00000497399 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
TCTN3-206ENST00000497399 MINPP1Q9UNW1 487 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
TCTN3-206ENST00000497399 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.48
TCTN3-206ENST00000497399 SCN4AP35499 1836 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 H0YIN7 160 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 TAF5LO75529 589 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 PDE8BO95263 885 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 LMNB1P20700 586 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 AACSQ86V21 672 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 TTLL6Q8N841 843 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
TCTN3-206ENST00000497399 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms