RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 ANKRD2Q9GZV1 360 aa12.92□□□□□ -0.34
USP13-205ENST00000497380 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
USP13-205ENST00000497380 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
USP13-205ENST00000497380 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
USP13-205ENST00000497380 CELF1Q92879 486 aaKnown RBP12.91□□□□□ -0.34
USP13-205ENST00000497380 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
USP13-205ENST00000497380 RIPOR2Q9Y4F9 1068 aa12.91□□□□□ -0.34
USP13-205ENST00000497380 TNRC6CQ9HCJ0 1690 aaKnown RBP12.9□□□□□ -0.34
USP13-205ENST00000497380 APBB1O00213 710 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 NUCB1Q02818 461 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 CHD1LQ86WJ1 897 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 SP8Q8IXZ3 490 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 PUS3Q9BZE2 481 aaKnown RBP12.9□□□□□ -0.34
USP13-205ENST00000497380 PIM2Q9P1W9 311 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 ANKRD31Q8N7Z5 1873 aa12.9□□□□□ -0.34
USP13-205ENST00000497380 CHD4Q14839 1912 aa12.9□□□□□ -0.35
USP13-205ENST00000497380 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
USP13-205ENST00000497380 SASH1O94885 1247 aa12.89□□□□□ -0.35
USP13-205ENST00000497380 PDE8BO95263 885 aa12.89□□□□□ -0.35
USP13-205ENST00000497380 CHRNA5P30532 468 aa12.89□□□□□ -0.35
USP13-205ENST00000497380 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
USP13-205ENST00000497380 KIF13BQ9NQT8 1826 aa12.89□□□□□ -0.35
USP13-205ENST00000497380 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
USP13-205ENST00000497380 DPEP1P16444 411 aa12.88□□□□□ -0.35
USP13-205ENST00000497380 CHRNDQ07001 517 aa12.88□□□□□ -0.35
USP13-205ENST00000497380 TFCP2Q12800 502 aa12.88□□□□□ -0.35
USP13-205ENST00000497380 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
USP13-205ENST00000497380 ATP6V0A2Q9Y487 856 aa12.88□□□□□ -0.35
USP13-205ENST00000497380 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
USP13-205ENST00000497380 IFIT1P09914 478 aaKnown RBP12.87□□□□□ -0.35
USP13-205ENST00000497380 KCNJ4P48050 445 aa12.87□□□□□ -0.35
USP13-205ENST00000497380 PUM3Q15397 648 aaKnown RBP12.87□□□□□ -0.35
USP13-205ENST00000497380 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
USP13-205ENST00000497380 GPATCH3Q96I76 525 aa12.87□□□□□ -0.35
USP13-205ENST00000497380 SYT17Q9BSW7 474 aa12.87□□□□□ -0.35
USP13-205ENST00000497380 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
USP13-205ENST00000497380 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
USP13-205ENST00000497380 XDHP47989 1333 aa12.87□□□□□ -0.35
USP13-205ENST00000497380 SLC5A1P13866 664 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
USP13-205ENST00000497380 LPIN2Q92539 896 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 FHDC1Q9C0D6 1143 aaPredicted RBP12.86□□□□□ -0.35
USP13-205ENST00000497380 LNPKQ9C0E8 428 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
USP13-205ENST00000497380 KCNA3P22001 575 aa12.85□□□□□ -0.35
USP13-205ENST00000497380 GORABQ5T7V8 394 aa12.85□□□□□ -0.35
USP13-205ENST00000497380 AACSQ86V21 672 aa12.85□□□□□ -0.35
USP13-205ENST00000497380 MPNDQ8N594 471 aa12.85□□□□□ -0.35
USP13-205ENST00000497380 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
USP13-205ENST00000497380 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
USP13-205ENST00000497380 A0A1B0GUL7 405 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
USP13-205ENST00000497380 CCDC158Q5M9N0 1113 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 HELBQ8NG08 1087 aaPredicted RBP12.84□□□□□ -0.35
USP13-205ENST00000497380 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 GGA1Q9UJY5 639 aa12.84□□□□□ -0.35
USP13-205ENST00000497380 COL11A2P13942 1736 aaPredicted RBP12.83□□□□□ -0.36
USP13-205ENST00000497380 ERC2O15083 957 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 TAF5LO75529 589 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 CAVIN4Q5BKX8 364 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
USP13-205ENST00000497380 EAF2Q96CJ1 260 aaPredicted RBP12.83□□□□□ -0.36
USP13-205ENST00000497380 EYA3Q99504 573 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 DLEC1Q9Y238 1755 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 ZNF804BA4D1E1 1349 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 TTC41PQ6P2S7 1318 aa12.83□□□□□ -0.36
USP13-205ENST00000497380 TAF1P21675 1872 aa12.82□□□□□ -0.36
USP13-205ENST00000497380 FGFR2P21802 821 aa12.82□□□□□ -0.36
USP13-205ENST00000497380 TIMM10P62072 90 aa12.82□□□□□ -0.36
USP13-205ENST00000497380 GPSM2P81274 684 aa12.82□□□□□ -0.36
USP13-205ENST00000497380 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
USP13-205ENST00000497380 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
USP13-205ENST00000497380 GNL3LQ9NVN8 582 aaKnown RBP12.82□□□□□ -0.36
USP13-205ENST00000497380 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 C21orf2O43822 256 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 UFL1O94874 794 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 MX1P20591 662 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
USP13-205ENST00000497380 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 XAGE2Q96GT9 111 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
USP13-205ENST00000497380 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
USP13-205ENST00000497380 ECHDC1Q9NTX5 307 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms