RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 KCTD17Q8N5Z5 321 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 GMCL1Q96IK5 515 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
MSH5-219ENST00000497269 STRN4Q9NRL3 753 aa9.38□□□□□ -0.91
MSH5-219ENST00000497269 BIN2Q9UBW5 565 aaPredicted RBP9.38□□□□□ -0.91
MSH5-219ENST00000497269 CLTCQ00610 1675 aaKnown RBP9.38□□□□□ -0.91
MSH5-219ENST00000497269 SETD1BQ9UPS6 1966 aaKnown RBP9.37□□□□□ -0.91
MSH5-219ENST00000497269 FKBP4Q02790 459 aaKnown RBP eCLIP9.37□□□□□ -0.91
MSH5-219ENST00000497269 LCE2CQ5TA81 110 aa9.37□□□□□ -0.91
MSH5-219ENST00000497269 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
MSH5-219ENST00000497269 AGLP35573 1532 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 ZNF335Q9H4Z2 1342 aaPredicted RBP9.36□□□□□ -0.91
MSH5-219ENST00000497269 KIF3BO15066 747 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 FGFR3P22607 806 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 ZAP70P43403 619 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 TNP2Q05952 138 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 RNFT1Q5M7Z0 435 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 RAB44Q7Z6P3 723 aaPredicted RBP9.36□□□□□ -0.91
MSH5-219ENST00000497269 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
MSH5-219ENST00000497269 ABTB2Q8N961 1025 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 GPR152Q8TDT2 470 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 CNTNAP3Q9BZ76 1288 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
MSH5-219ENST00000497269 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 PHF24Q9UPV7 400 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 ATP7AQ04656 1500 aa9.36□□□□□ -0.91
MSH5-219ENST00000497269 A2MP01023 1474 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 CAMSAP1Q5T5Y3 1602 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 ICMTO60725 284 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 GMPRP36959 345 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 EIF1AXP47813 144 aaKnown RBP9.35□□□□□ -0.91
MSH5-219ENST00000497269 ARSDP51689 593 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 CTBSQ01459 385 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 GAS6Q14393 721 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 NOM1Q5C9Z4 860 aaKnown RBP9.35□□□□□ -0.91
MSH5-219ENST00000497269 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 NDFIP2Q9NV92 336 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 REREQ9P2R6 1566 aa9.35□□□□□ -0.91
MSH5-219ENST00000497269 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
MSH5-219ENST00000497269 SOWAHDA6NJG2 315 aa9.34□□□□□ -0.91
MSH5-219ENST00000497269 MX2P20592 715 aa9.34□□□□□ -0.91
MSH5-219ENST00000497269 DNM1Q05193 864 aaKnown RBP9.34□□□□□ -0.91
MSH5-219ENST00000497269 SF3B2Q13435 895 aaKnown RBP9.34□□□□□ -0.91
MSH5-219ENST00000497269 IER5Q5VY09 327 aa9.34□□□□□ -0.91
MSH5-219ENST00000497269 MARK1Q9P0L2 795 aa9.34□□□□□ -0.91
MSH5-219ENST00000497269 GNEQ9Y223 722 aaKnown RBP9.34□□□□□ -0.91
MSH5-219ENST00000497269 CEP162Q5TB80 1403 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 OPLAHO14841 1288 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 VSIG8P0DPA2 414 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 INPP5BP32019 993 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 KRT25Q7Z3Z0 450 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 EDEM1Q92611 657 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 EGFL7Q9UHF1 273 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
MSH5-219ENST00000497269 PTPRTO14522 1441 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 NCOA1Q15788 1441 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 CNTLNQ9NXG0 1405 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 EFSO43281 561 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 FAM13AO94988 1023 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 BMP4P12644 408 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 KRT76Q01546 638 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
MSH5-219ENST00000497269 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
MSH5-219ENST00000497269 RTCBQ9Y3I0 505 aaKnown RBP9.32□□□□□ -0.92
MSH5-219ENST00000497269 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 PATL2C9JE40 543 aaKnown RBP9.31□□□□□ -0.92
MSH5-219ENST00000497269 EPB42P16452 691 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 GRNP28799 593 aaKnown RBP9.31□□□□□ -0.92
MSH5-219ENST00000497269 PIP4K2BP78356 416 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 SLC30A3Q99726 388 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 CCDC87Q9NVE4 849 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 INO80Q9ULG1 1556 aaPredicted RBP9.31□□□□□ -0.92
MSH5-219ENST00000497269 LTBP4Q8N2S1 1624 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 PTPRKQ15262 1439 aa9.31□□□□□ -0.92
MSH5-219ENST00000497269 PLEKHH2Q8IVE3 1493 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 MBD5Q9P267 1494 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 A6NHS1 94 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 C2CD2LO14523 706 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
MSH5-219ENST00000497269 NUDT16Q96DE0 195 aaKnown RBP9.3□□□□□ -0.92
MSH5-219ENST00000497269 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 PRR12Q9ULL5 1215 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 WASHC2CQ9Y4E1 1318 aa9.3□□□□□ -0.92
MSH5-219ENST00000497269 NCOA2Q15596 1464 aa9.29□□□□□ -0.92
MSH5-219ENST00000497269 SPEM2Q0P670 501 aa9.29□□□□□ -0.92
MSH5-219ENST00000497269 BHMTQ93088 406 aa9.29□□□□□ -0.92
MSH5-219ENST00000497269 NPATQ14207 1427 aa9.29□□□□□ -0.92
MSH5-219ENST00000497269 MROH2AA6NES4 1674 aa9.29□□□□□ -0.92
MSH5-219ENST00000497269 DHX29Q7Z478 1369 aaKnown RBP9.28□□□□□ -0.92
MSH5-219ENST00000497269 MYO3AQ8NEV4 1616 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 EHBP1L1Q8N3D4 1523 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 TBC1D8BQ0IIM8 1120 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 C8orf34Q49A92 452 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms