RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 MTMR3Q13615 1198 aa8.28□□□□□ -1.08
SOX2-OT-216ENST00000497122 SHISA2Q6UWI4 295 aa8.28□□□□□ -1.08
SOX2-OT-216ENST00000497122 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
SOX2-OT-216ENST00000497122 DMGDHQ9UI17 866 aaKnown RBP8.28□□□□□ -1.08
SOX2-OT-216ENST00000497122 DCTN4Q9UJW0 460 aa8.28□□□□□ -1.08
SOX2-OT-216ENST00000497122 FOXO3O43524 673 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 SASH3O75995 380 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 MICAL2O94851 1124 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 RECKO95980 971 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 RARAP10276 462 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 INPP5BP32019 993 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 ZC3H6P61129 1189 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 OCLNQ16625 522 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 ELMSAN1Q6PJG2 1045 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 DHX32Q7L7V1 743 aaKnown RBP8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 FBXO33Q7Z6M2 555 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 GTF3C2Q8WUA4 911 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 C8orf37Q96NL8 207 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 USP20Q9Y2K6 914 aa8.27□□□□□ -1.09
SOX2-OT-216ENST00000497122 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
SOX2-OT-216ENST00000497122 PCSK7Q16549 785 aa8.26□□□□□ -1.09
SOX2-OT-216ENST00000497122 NKAPLQ5M9Q1 402 aa8.26□□□□□ -1.09
SOX2-OT-216ENST00000497122 ASB16Q96NS5 453 aa8.26□□□□□ -1.09
SOX2-OT-216ENST00000497122 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
SOX2-OT-216ENST00000497122 DYRK3O43781 588 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 SELPP16109 830 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 VAMP1P23763 118 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 GRNP28799 593 aaKnown RBP8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 WEE1P30291 646 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 MBTPS1Q14703 1052 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 EAPPQ56P03 285 aaPredicted RBP8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 NAALADL2Q58DX5 795 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 HFE2Q6ZVN8 426 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 RGL4Q8IZJ4 473 aa8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
SOX2-OT-216ENST00000497122 EIF2AK2P19525 551 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 NRG1Q02297 640 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 PERM1Q5SV97 790 aa8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 TXNRD3Q86VQ6 643 aa8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 FMR1NBQ8N0W7 255 aaPredicted RBP8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 CMTR1Q8N1G2 835 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 IFT43Q96FT9 208 aa8.24□□□□□ -1.09
SOX2-OT-216ENST00000497122 MAP3K6O95382 1288 aa8.23□□□□□ -1.09
SOX2-OT-216ENST00000497122 ERCC5P28715 1186 aaPredicted RBP8.23□□□□□ -1.09
SOX2-OT-216ENST00000497122 ADGRE1Q14246 886 aa8.23□□□□□ -1.09
SOX2-OT-216ENST00000497122 MSL1Q68DK7 614 aa8.23□□□□□ -1.09
SOX2-OT-216ENST00000497122 WFDC8Q8IUA0 241 aa8.23□□□□□ -1.09
SOX2-OT-216ENST00000497122 RTCBQ9Y3I0 505 aaKnown RBP8.23□□□□□ -1.09
SOX2-OT-216ENST00000497122 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 PRSS36Q5K4E3 855 aa8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 TREML1Q86YW5 311 aa8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 TP53INP1Q96A56 240 aa8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 LENG1Q96BZ8 264 aaPredicted RBP8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 SMG9Q9H0W8 520 aaKnown RBP8.22□□□□□ -1.09
SOX2-OT-216ENST00000497122 ZBTB42B2RXF5 422 aa8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 XYLBO75191 536 aa8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 PLAURQ03405 335 aa8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 FKBP5Q13451 457 aaPredicted RBP8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 SF3A1Q15459 793 aaKnown RBP8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 CAPN12Q6ZSI9 719 aa8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 TRPM4Q8TD43 1214 aa8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 LRFN2Q9ULH4 789 aa8.21□□□□□ -1.1
SOX2-OT-216ENST00000497122 SMARCA5O60264 1052 aaPredicted RBP8.2□□□□□ -1.1
SOX2-OT-216ENST00000497122 GPLD1P80108 840 aa8.2□□□□□ -1.1
SOX2-OT-216ENST00000497122 MYO19Q96H55 970 aa8.2□□□□□ -1.1
SOX2-OT-216ENST00000497122 NSUN5Q96P11 429 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-216ENST00000497122 FRRS1LQ9P0K9 344 aa8.2□□□□□ -1.1
SOX2-OT-216ENST00000497122 PSAPP07602 524 aa8.19□□□□□ -1.1
SOX2-OT-216ENST00000497122 ARHGAP4P98171 946 aa8.19□□□□□ -1.1
SOX2-OT-216ENST00000497122 C9orf131Q5VYM1 1079 aa8.19□□□□□ -1.1
SOX2-OT-216ENST00000497122 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
SOX2-OT-216ENST00000497122 UBXN4Q92575 508 aa8.19□□□□□ -1.1
SOX2-OT-216ENST00000497122 J3QW42 95 aa8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 OPLAHO14841 1288 aa8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 PTCD1O75127 700 aaKnown RBP8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 COX20Q5RI15 118 aa8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 GDF6Q6KF10 455 aaPredicted RBP8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 BACH2Q9BYV9 841 aa8.18□□□□□ -1.1
SOX2-OT-216ENST00000497122 PPM1GO15355 546 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 GHRHP01286 108 aa8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 IREB2P48200 963 aaKnown RBP8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 NRLP54845 237 aa8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 FOXD4L6Q3SYB3 417 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 FOXD4L3Q6VB84 417 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 DTWD1Q8N5C7 304 aa8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 RBSNQ9H1K0 784 aa8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
SOX2-OT-216ENST00000497122 H2AFB1P0C5Y9 115 aa8.16□□□□□ -1.1
SOX2-OT-216ENST00000497122 H2AFB2P0C5Z0 115 aa8.16□□□□□ -1.1
SOX2-OT-216ENST00000497122 XPCQ01831 940 aaPredicted RBP8.16□□□□□ -1.1
SOX2-OT-216ENST00000497122 GRIK5Q16478 980 aa8.16□□□□□ -1.1
SOX2-OT-216ENST00000497122 ECM1Q16610 540 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms