RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 AVENQ9NQS1 362 aaPredicted RBP5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 CNTN3Q9P232 1028 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 IGF1RP08069 1367 aa5.62□□□□□ -1.51
EXOSC3-208ENST00000496910 ANKRD33BA6NCL7 494 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 MMP20O60882 483 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 TNFRSF21O75509 655 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 ARAFP10398 606 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 NFKB1P19838 968 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 SRSF11Q05519 484 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 FBXO33Q7Z6M2 555 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 NLRP13Q86W25 1043 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 ACDQ96AP0 544 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 DMRTB1Q96MA1 342 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 CNTNAP3BQ96NU0 1288 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 CNTNAP3Q9BZ76 1288 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 ELP3Q9H9T3 547 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 EFCC1Q9HA90 598 aa5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 FOXD3Q9UJU5 478 aaPredicted RBP5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.61□□□□□ -1.51
EXOSC3-208ENST00000496910 IFT140Q96RY7 1462 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 ATAD2BQ9ULI0 1458 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 ZBTB42B2RXF5 422 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 SIN3BO75182 1162 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 CYP2E1P05181 493 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 RPLP1P05386 114 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 P4HBP07237 508 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 BMP4P12644 408 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 ORC1Q13415 861 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 AAMPQ13685 434 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 KRT25Q7Z3Z0 450 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 SYT9Q86SS6 491 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 OR13H1Q8NG92 308 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 TNFRSF25Q93038 417 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 AMOTL2Q9Y2J4 779 aa5.6□□□□□ -1.51
EXOSC3-208ENST00000496910 CFAP43Q8NDM7 1665 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 MADDQ8WXG6 1647 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 ADARB2-AS1A8MUL3 147 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 WIPF1O43516 503 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 ADAMTS2O95450 1211 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 SOX18P35713 384 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 MAP2K3P46734 347 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 PCBP4P57723 403 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 EHHADHQ08426 723 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 PDE3BQ13370 1112 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 C8orf34Q49A92 452 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 ZNF438Q7Z4V0 828 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 C1orf127Q8N9H9 656 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 WHAMMQ8TF30 809 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 BHMTQ93088 406 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 ABI2Q9NYB9 513 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 TLR7Q9NYK1 1049 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 NAGPAQ9UK23 515 aa5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 FNDC3AQ9Y2H6 1198 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-208ENST00000496910 URB2Q14146 1524 aaKnown RBP5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 CADPSQ9ULU8 1353 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 UNCXA6NJT0 531 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 KIF4AO95239 1232 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 RARAP10276 462 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 PCSK2P16519 638 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 COL19A1Q14993 1142 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 ENOX2Q16206 610 aaKnown RBP5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 USPL1Q5W0Q7 1092 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 SLCO4C1Q6ZQN7 724 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 DHX32Q7L7V1 743 aaKnown RBP5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 TRPM4Q8TD43 1214 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 SNX29Q8TEQ0 813 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 SETDB2Q96T68 719 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 OXCT2Q9BYC2 517 aaPredicted RBP5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 NIF3L1Q9GZT8 377 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 GGA1Q9UJY5 639 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 RAPGEF6Q8TEU7 1601 aa5.58□□□□□ -1.52
EXOSC3-208ENST00000496910 EREGO14944 169 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 HOXB4P17483 251 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 ADH6P28332 368 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 GPLD1P80108 840 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 LYPD4Q6UWN0 246 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 ZSCAN29Q8IWY8 852 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 FAM177A1Q8N128 213 aaPredicted RBP5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 ZFYVE28Q9HCC9 887 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 SALL4Q9UJQ4 1053 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 STARD13Q9Y3M8 1113 aa5.57□□□□□ -1.52
EXOSC3-208ENST00000496910 NEURL1BA8MQ27 555 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 SHISA8B8ZZ34 492 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 EIF1AYO14602 144 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 EPXP11678 715 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 ERCC3P19447 782 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 NRLP54845 237 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 TAGLNQ01995 201 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 PEAR1Q5VY43 1037 aaPredicted RBP5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 ZNF385CQ66K41 422 aaPredicted RBP5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 CSRNP1Q96S65 589 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 IGSF5Q9NSI5 407 aa5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 DNAJB12Q9NXW2 375 aaKnown RBP5.56□□□□□ -1.52
EXOSC3-208ENST00000496910 OIP5O43482 229 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 TOM1O60784 492 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 CELA2BP08218 269 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 ACPPP15309 386 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 ADAMTSL4Q6UY14 1074 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 GALNT12Q8IXK2 581 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 GOLGA6L1Q8N7Z2 621 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms